C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6, member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000068787 slc6a17 7955 + 8:25714204-25743935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000099607 slc6a17-001 25714207-25743935 protein_coding
  ENSDART00000156570 slc6a17-201 25714204-25742287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000099607ENSDART00000156570
Transcript ID Heart Kidney Liver Muscle
ENSDART00000099607 0.047±0.03 0.087±0.01 0.037±0.00 N/A
ENSDART00000156570 0.018±0.00 0.138±0.00 N/A 0.464±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U2 CIL_0006U2_0001 CGP 8:25714204-25818251

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005887 IEA integral to plasma membrane
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197106 SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 protein_coding Homo_sapiens
ENSMUSG00000027894 Slc6a17 solute carrier family 6 (neurotransmitter transporter), member 17 protein_coding Mus_musculus

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