C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000156570 slc6a17-201 ENSDARG00000068787 7955 + 8:25714204-25742287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000156570
Transcript ID Heart Kidney Muscle
ENSDART00000156570 0.018±0.00 0.138±0.00 0.464±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U2 CIL_0006U2_0001 CGP 8:25714204-25818251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006836 IEA neurotransmitter transport
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029499 Slc6a17-002 protein_coding Mus_musculus 0 926
ENSMUST00000168211 Slc6a17-003 nonsense_mediated_decay Mus_musculus 0 963
ENSMUST00000169449 Slc6a17-001 protein_coding Mus_musculus 0 963
ENST00000331565 SLC6A17-001 protein_coding Homo_sapiens 0 965

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