C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6 (neutral amino acid transporter), member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197106 SLC6A17 9606 + 1:110150486-110202202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331565 SLC6A17-001 110150486-110202202 protein_coding
  ENST00000465159 SLC6A17-002 110192568-110194988 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331565 0.117±0.00 0.027±0.00 0.122±0.00 19.820±12.43 0.013±0.00 0.240±0.00 0.011±0.01 0.806±0.78 0.023±0.00 0.042±0.00 0.035±0.00 0.028±0.01 0.483±0.17 1.223±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U2 CIL_0006U2_0002 CGP 1:110150486-110283100

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005887 IEA integral component of plasma membrane
GO:0006836 IEA neurotransmitter transport
GO:0008021 ISS synaptic vesicle
GO:0015804 ISS neutral amino acid transport
GO:0015816 ISS glycine transport
GO:0015820 ISS leucine transport
GO:0015824 ISS proline transport
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0032328 ISS alanine transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068787 slc6a17 solute carrier family 6, member 17 protein_coding Danio_rerio
ENSMUSG00000027894 Slc6a17 solute carrier family 6 (neurotransmitter transporter), member 17 protein_coding Mus_musculus

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