C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 53 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069324 vps53 7955 - 15:24454277-24506951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000078095 vps53-201 24454277-24506894 protein_coding
  ENSDART00000122184 vps53-001 24454277-24506951 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078095ENSDART00000122184
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078095 31.269±1.75 4.568±0.31 2.812±1.10 N/A N/A
ENSDART00000122184 10.784±0.99 3.136±0.08 5.670±0.00 0.199±0.00 1.322±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AN CIL_0006AN_0001 CGP 15:24449580-24506951

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141252 VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000017288 Vps53 vacuolar protein sorting 53 (yeast) protein_coding Mus_musculus

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