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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006AN_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000093931-ENSDARG00000069324 | CGP | 7955 | 15:24449580-24506951  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000069324  (vps53)vacuolar protein sorting 53 homolog (S. cerevisiae) |
ENSDART00000078095 (vps53-201)
|
24454277-24506894 | protein_coding | |
|
ENSDART00000122184 (vps53-001)
|
24454277-24506951 | protein_coding | ||
|
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| CIL_0006AN_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000183688-ENSG00000141252 | CGP | 9606 | 17:439978-721717 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000141252 (VPS53) vacuolar protein sorting 53 homolog (S. cerevisiae) |
ENST00000291074 (VPS53-002)
|
532318-714843 | protein_coding | |
|
ENST00000389040 (VPS53-004)
|
532827-714709 | nonsense_mediated_decay | ||
|
ENST00000401468 (VPS53-003)
|
532827-714709 | protein_coding | ||
|
ENST00000437048 (VPS53-001)
|
508668-714856 | protein_coding | ||
|
ENST00000541903 (VPS53-017)
|
519119-522995 | processed_transcript | ||
|
ENST00000570359 (VPS53-010)
|
536424-539204 | retained_intron | ||
|
ENST00000570510 (VPS53-012)
|
697418-714513 | processed_transcript | ||
|
ENST00000570650 (VPS53-019)
|
600880-628231 | protein_coding | ||
|
ENST00000570771 (VPS53-018)
|
519855-532993 | retained_intron | ||
|
ENST00000571456 (VPS53-021)
|
705625-714814 | processed_transcript | ||
|
ENST00000571805 (VPS53-006)
|
532708-714846 | protein_coding | ||
|
ENST00000572259 (VPS53-014)
|
674367-676345 | retained_intron | ||
|
ENST00000572334 (VPS53-013)
|
631550-685195 | processed_transcript | ||
|
ENST00000572607 (VPS53-016)
|
551634-562686 | retained_intron | ||
|
ENST00000573028 (VPS53-005)
|
531968-714856 | nonsense_mediated_decay | ||
|
ENST00000574029 (VPS53-020)
|
517382-714830 | protein_coding | ||
|
ENST00000575100 (VPS53-022)
|
673696-675667 | retained_intron | ||
|
ENST00000575207 (VPS53-015)
|
657429-714791 | processed_transcript | ||
|
ENST00000576019 (VPS53-011)
|
653326-721717 | protein_coding | ||
|
ENST00000576149 (VPS53-009)
|
518953-676407 | processed_transcript | ||
|
ENSG00000183688 (FAM101B) family with sequence similarity 101, member B |
ENST00000329099 (FAM101B-001)
|
439978-445939 | protein_coding | |
|
ENSG00000262708 (RP11-411G7.2) |
ENST00000574104 (RP11-411G7.2-001)
|
616002-616595 | processed_pseudogene | |
|
ENSG00000263300 (RP5-1029F21.4) |
ENST00000570974 (RP5-1029F21.4-001)
|
523140-540576 | antisense | |
|
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| CIL_0006AN_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000020846-ENSMUSG00000017288 | CGP | 10090 | 11:76019194-76179647 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000017286 (Glod4) glyoxalase domain containing 4 |
ENSMUST00000017430 (Glod4-001)
|
76221510-76243725 | protein_coding | |
|
ENSMUST00000164022 (Glod4-007)
|
76233244-76243610 | protein_coding | ||
|
ENSMUST00000167883 (Glod4-009)
|
76234247-76239572 | retained_intron | ||
|
ENSMUST00000168055 (Glod4-008)
|
76237713-76243638 | protein_coding | ||
|
ENSMUST00000169532 (Glod4-003)
|
76120987-76243675 | retained_intron | ||
|
ENSMUST00000169701 (Glod4-002)
|
76210571-76243663 | protein_coding | ||
|
ENSMUST00000170017 (Glod4-005)
|
76221607-76243651 | nonsense_mediated_decay | ||
|
ENSMUST00000170590 (Glod4-006)
|
76234519-76243669 | nonsense_mediated_decay | ||
|
ENSMUST00000170710 (Glod4-004)
|
76221794-76243459 | protein_coding | ||
|
ENSMUSG00000017288 (Vps53) vacuolar protein sorting 53 (yeast) |
ENSMUST00000056601 (Vps53-001)
|
76046226-76179647 | protein_coding | |
|
ENSMUST00000094015 (Vps53-013)
|
76046297-76179617 | protein_coding | ||
|
ENSMUST00000108419 (Vps53-014)
|
76046296-76179624 | protein_coding | ||
|
ENSMUST00000129256 (Vps53-002)
|
76176959-76179638 | protein_coding | ||
|
ENSMUST00000140886 (Vps53-003)
|
76170514-76179612 | processed_transcript | ||
|
ENSMUST00000141773 (Vps53-004)
|
76121568-76138748 | processed_transcript | ||
|
ENSMUST00000143163 (Vps53-006)
|
76062041-76092679 | retained_intron | ||
|
ENSMUST00000143459 (Vps53-005)
|
76134432-76154969 | processed_transcript | ||
|
ENSMUST00000163878 (Vps53-010)
|
76117059-76179532 | nonsense_mediated_decay | ||
|
ENSMUST00000166084 (Vps53-011)
|
76121563-76175792 | processed_transcript | ||
|
ENSMUST00000166436 (Vps53-009)
|
76117674-76166201 | protein_coding | ||
|
ENSMUST00000166752 (Vps53-015)
|
76062985-76179499 | nonsense_mediated_decay | ||
|
ENSMUST00000167114 (Vps53-016)
|
76062980-76179499 | protein_coding | ||
|
ENSMUST00000169734 (Vps53-012)
|
76062985-76179516 | nonsense_mediated_decay | ||
|
ENSMUST00000170143 (Vps53-008)
|
76121447-76179587 | retained_intron | ||
|
ENSMUST00000170730 (Vps53-007)
|
76136199-76179634 | protein_coding | ||
|
ENSMUSG00000020846 (Fam101b) family with sequence similarity 101, member B |
ENSMUST00000021207 (Fam101b-001)
|
76019194-76027782 | protein_coding | |
|
ENSMUSG00000080701 (Gm12340) predicted gene 12340 |
ENSMUST00000121617 (Gm12340-001)
|
76144258-76144719 | unprocessed_pseudogene | |
|
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Expression Patterns
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