C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: slow myosin heavy chain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071430 smyhc1 7955 - 24:42241037-42252740 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000004536 smyhc1-201 42244830-42252735 protein_coding
  ENSDART00000045928 smyhc1-202 42245685-42252740 protein_coding
  ENSDART00000056853 smyhc1-203 42241037-42252735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000045928ENSDART00000056853
Transcript ID Brain Heart Kidney Muscle
ENSDART00000045928 0.041±0.01 N/A N/A N/A
ENSDART00000056853 0.014±0.00 0.034±0.02 0.108±0.00 2.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z7 CIL_0004Z7_0002 CGP 24:42241037-42285123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016459 IEA myosin complex
GO:0030240 IMP skeletal muscle thin filament assembly
GO:0031444 IGI slow-twitch skeletal muscle fiber contraction
GO:0071688 IMP striated muscle myosin thick filament assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000092054 MYH7 myosin, heavy chain 7, cardiac muscle, beta protein_coding Homo_sapiens
ENSG00000197616 MYH6 myosin, heavy chain 6, cardiac muscle, alpha protein_coding Homo_sapiens
ENSMUSG00000040752 Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha protein_coding Mus_musculus
ENSMUSG00000053093 Myh7 myosin, heavy polypeptide 7, cardiac muscle, beta protein_coding Mus_musculus

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