C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Z7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045242-ENSDARG00000093715 CGP 7955 24:42297325-42330281
GeneTranscriptPositionBiotype
ENSDARG00000045242 (smyhc3)
slow myosin heavy chain 3 		ENSDART00000066527 (smyhc3-201) 42297328-42309874 protein_coding
ENSDART00000150060 (smyhc3-001) 42297325-42310039 protein_coding
ENSDARG00000093715 (si:ch211-24n20.3)
si:ch211-24n20.3 		ENSDART00000135233 (si:ch211-24n20.3-201) 42313696-42330273 protein_coding
ENSDART00000150162 (si:ch211-24n20.3-001) 42313594-42330281 protein_coding

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CIL_0004Z7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071430-ENSDARG00000071433 CGP 7955 24:42241037-42285123
GeneTranscriptPositionBiotype
ENSDARG00000071433 (smyhc2)
slow myosin heavy chain 2 		ENSDART00000056849 (smyhc2-001) 42264601-42285123 protein_coding
ENSDART00000124862 (smyhc2-003) 42280392-42285123 protein_coding
ENSDART00000147211 (smyhc2-002) 42282614-42285123 retained_intron
ENSDART00000149247 (smyhc2-004) 42278534-42280927 retained_intron

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CIL_0004Z7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071433-ENSDARG00000045242 CGP 7955 24:42264601-42310039
GeneTranscriptPositionBiotype
ENSDARG00000045242 (smyhc3)
slow myosin heavy chain 3 		ENSDART00000066527 (smyhc3-201) 42297328-42309874 protein_coding
ENSDART00000150060 (smyhc3-001) 42297325-42310039 protein_coding
ENSDARG00000071433 (smyhc2)
slow myosin heavy chain 2 		ENSDART00000056849 (smyhc2-001) 42264601-42285123 protein_coding
ENSDART00000124862 (smyhc2-003) 42280392-42285123 protein_coding
ENSDART00000147211 (smyhc2-002) 42282614-42285123 retained_intron
ENSDART00000149247 (smyhc2-004) 42278534-42280927 retained_intron

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CIL_0004Z7_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079782-ENSDARG00000079564 CGP 7955 2:23574503-23607626
GeneTranscriptPositionBiotype
ENSDARG00000079564 (vmhc)
ventricular myosin heavy chain 		ENSDART00000099532 (vmhc-001) 23594235-23607626 protein_coding
ENSDARG00000079782 (vmhcl)
ventricular myosin heavy chain-like 		ENSDART00000078958 (vmhcl-201) 23574779-23589722 protein_coding
ENSDART00000123565 (vmhcl-004) 23574504-23577707 protein_coding
ENSDART00000124461 (vmhcl-007) 23588067-23588829 retained_intron
ENSDART00000128784 (vmhcl-001) 23574505-23589822 protein_coding
ENSDART00000138076 (vmhcl-006) 23587063-23587595 retained_intron
ENSDART00000141922 (vmhcl-002) 23574503-23577103 protein_coding
ENSDART00000146213 (vmhcl-003) 23574503-23575387 retained_intron
ENSDART00000152105 (vmhcl-005) 23583351-23585307 nonsense_mediated_decay

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CIL_0004Z7_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000093148-ENSDARG00000092357 CGP 7955 24:42471551-42516044
GeneTranscriptPositionBiotype
ENSDARG00000092357 (CU633479.5)
Uncharacterized protein 		ENSDART00000137989 (CU633479.5-201) 42505089-42516044 protein_coding
ENSDARG00000093148 (CU633479.6)
Uncharacterized protein 		ENSDART00000137082 (CU633479.6-201) 42471551-42489581 protein_coding

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CIL_0004Z7_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000093715-ENSDARG00000092902 CGP 7955 24:42313594-42357098
GeneTranscriptPositionBiotype
ENSDARG00000092902 (CR450736.2)
Uncharacterized protein 		ENSDART00000133338 (CR450736.2-201) 42346235-42357098 protein_coding
ENSDARG00000093715 (si:ch211-24n20.3)
si:ch211-24n20.3 		ENSDART00000135233 (si:ch211-24n20.3-201) 42313696-42330273 protein_coding
ENSDART00000150162 (si:ch211-24n20.3-001) 42313594-42330281 protein_coding

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CIL_0004Z7_0007 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197616-ENSG00000092054 CGP 9606 14:23381990-23435718
GeneTranscriptPositionBiotype
ENSG00000092054 (MYH7)
myosin, heavy chain 7, cardiac muscle, beta 		ENST00000355349 (MYH7-001) 23412738-23435718 protein_coding
ENSG00000197616 (MYH6)
myosin, heavy chain 6, cardiac muscle, alpha 		ENST00000356287 (MYH6-001) 23382019-23407592 protein_coding
ENST00000405093 (MYH6-201) 23381990-23408277 protein_coding
ENST00000557461 (MYH6-002) 23399712-23407616 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0004Z7_0008 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040752-ENSMUSG00000053093 CGP 10090 14:54941921-54994634
GeneTranscriptPositionBiotype
ENSMUSG00000040752 (Myh6)
myosin, heavy polypeptide 6, cardiac muscle, alpha 		ENSMUST00000081857 (Myh6-201) 54941921-54966607 protein_coding
ENSMUST00000111456 (Myh6-002) 54965270-54966927 protein_coding
ENSMUST00000124930 (Myh6-004) 54963958-54966574 protein_coding
ENSMUST00000131892 (Myh6-005) 54957072-54957907 retained_intron
ENSMUST00000134256 (Myh6-003) 54963958-54966605 protein_coding
ENSMUST00000145322 (Myh6-001) 54952246-54966641 protein_coding
ENSMUSG00000053093 (Myh7)
myosin, heavy polypeptide 7, cardiac muscle, beta 		ENSMUST00000102803 (Myh7-001) 54970688-54994634 protein_coding
ENSMUST00000149852 (Myh7-002) 54981174-54987418 retained_intron
ENSMUST00000153783 (Myh7-003) 54992692-54994548 protein_coding
ENSMUST00000168485 (Myh7-201) 54970767-54994626 protein_coding
ENSMUSG00000077928 (Mir208b)
microRNA 208b 		ENSMUST00000104735 (Mir208b-201) 54975700-54975776 miRNA
ENSMUSG00000090889 (Gm17428)
predicted gene, 17428 		ENSMUST00000085949 (Gm17428-201) 54976933-54977025 protein_coding
ENSMUSG00000097652 (D830015G02Rik)
myosin heavy chain associated RNA transcript 		ENSMUST00000181782 (D830015G02Rik-001) 54968787-54974349 antisense
ENSMUST00000185798 (D830015G02Rik-002) 54968678-54969577 antisense

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z7_0001ENSDARG00000045242ENSDART00000066527ENSDART00000150060ENSDARG00000093715ENSDART00000135233ENSDART00000150162CIL_0004Z7_0002ENSDARG00000071433ENSDART00000056849ENSDART00000124862ENSDART00000147211ENSDART00000149247CIL_0004Z7_0003ENSDARG00000045242ENSDART00000066527ENSDART00000150060ENSDARG00000071433ENSDART00000056849ENSDART00000124862ENSDART00000147211ENSDART00000149247CIL_0004Z7_0004ENSDARG00000079564ENSDART00000099532ENSDARG00000079782ENSDART00000078958ENSDART00000123565ENSDART00000124461ENSDART00000128784ENSDART00000138076ENSDART00000141922ENSDART00000146213ENSDART00000152105CIL_0004Z7_0005ENSDARG00000092357ENSDART00000137989ENSDARG00000093148ENSDART00000137082CIL_0004Z7_0006ENSDARG00000092902ENSDART00000133338ENSDARG00000093715ENSDART00000135233ENSDART00000150162CIL_0004Z7_0007ENSG00000092054ENST00000355349ENSG00000197616ENST00000356287ENST00000405093ENST00000557461CIL_0004Z7_0008ENSMUSG00000040752ENSMUST00000081857ENSMUST00000111456ENSMUST00000124930ENSMUST00000131892ENSMUST00000134256ENSMUST00000145322ENSMUSG00000053093ENSMUST00000102803ENSMUST00000149852ENSMUST00000153783ENSMUST00000168485ENSMUSG00000077928ENSMUST00000104735ENSMUSG00000090889ENSMUST00000085949ENSMUSG00000097652ENSMUST00000181782ENSMUST00000185798
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z7_0001ENSDARG00000045242ENSDART00000066527ENSDART00000150060ENSDARG00000093715ENSDART00000135233ENSDART00000150162CIL_0004Z7_0002ENSDARG00000071433ENSDART00000056849CIL_0004Z7_0003ENSDARG00000045242ENSDART00000066527ENSDART00000150060ENSDARG00000071433ENSDART00000056849CIL_0004Z7_0004ENSDARG00000079564ENSDART00000099532ENSDARG00000079782ENSDART00000078958ENSDART00000123565ENSDART00000124461ENSDART00000128784ENSDART00000146213CIL_0004Z7_0005ENSDARG00000092357ENSDART00000137989ENSDARG00000093148ENSDART00000137082CIL_0004Z7_0006ENSDARG00000092902ENSDART00000133338ENSDARG00000093715ENSDART00000135233ENSDART00000150162CIL_0004Z7_0007ENSG00000092054ENST00000355349ENSG00000197616ENST00000356287ENST00000405093ENST00000557461CIL_0004Z7_0008ENSMUSG00000040752ENSMUST00000081857ENSMUST00000111456ENSMUST00000145322ENSMUSG00000053093ENSMUST00000102803ENSMUST00000149852ENSMUST00000168485ENSMUSG00000077928ENSMUST00000104735ENSMUSG00000090889ENSMUST00000085949ENSMUSG00000097652ENSMUST00000181782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045242 ENSDART00000066527 N/A N/A N/A 0.029±0.01 N/A N/A 0.055±0.00 0.169±0.06 N/A N/A N/A N/A N/A N/A
ENSDART00000150060 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 4.409±0.00 N/A N/A N/A
ENSDARG00000093715 ENSDART00000135233 N/A N/A N/A 0.023±0.01 N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150162 N/A N/A N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A 8.059±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071433 ENSDART00000056849 N/A N/A N/A 0.107±0.10 N/A N/A 0.009±0.00 0.895±0.00 0.006±0.00 N/A 21.270±0.00 N/A N/A N/A
ENSDART00000124862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045242 ENSDART00000066527 N/A N/A N/A 0.029±0.01 N/A N/A 0.055±0.00 0.169±0.06 N/A N/A N/A N/A N/A N/A
ENSDART00000150060 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 4.409±0.00 N/A N/A N/A
ENSDARG00000071433 ENSDART00000056849 N/A N/A N/A 0.107±0.10 N/A N/A 0.009±0.00 0.895±0.00 0.006±0.00 N/A 21.270±0.00 N/A N/A N/A
ENSDART00000124862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079564 ENSDART00000099532 N/A N/A N/A 0.048±0.03 N/A N/A 20.456±13.19 1.138±1.05 0.027±0.00 N/A 1.041±0.00 N/A N/A N/A
ENSDARG00000079782 ENSDART00000078958 N/A N/A N/A 0.560±0.00 N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000123565 N/A N/A N/A 0.526±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000124461 N/A N/A N/A N/A N/A N/A 8246.010±0.00 N/A 10.111±0.00 N/A N/A N/A N/A N/A
ENSDART00000128784 N/A N/A N/A 0.455±0.60 N/A N/A 1470.713±1357.28 0.770±0.00 2.529±0.00 N/A 1.967±0.00 N/A N/A N/A
ENSDART00000138076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146213 N/A N/A N/A 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000092357 ENSDART00000137989 N/A N/A N/A 0.020±0.00 N/A N/A 0.438±0.42 0.168±0.00 0.006±0.00 N/A 1.065±0.00 N/A N/A N/A
ENSDARG00000093148 ENSDART00000137082 N/A N/A N/A 0.032±0.00 N/A N/A 0.019±0.00 0.319±0.00 N/A N/A 3.939±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000092902 ENSDART00000133338 N/A N/A N/A N/A N/A N/A 0.063±0.06 0.046±0.00 N/A N/A 1.264±0.00 N/A N/A N/A
ENSDARG00000093715 ENSDART00000135233 N/A N/A N/A 0.023±0.01 N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150162 N/A N/A N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A 8.059±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092054 ENST00000355349 0.043±0.00 0.038±0.00 0.198±0.00 0.382±0.25 45.431±43.79 0.489±0.37 935.981±0.00 0.071±0.01 3.717±3.39 0.900±0.89 938.781±360.42 0.159±0.10 7.369±7.29 30.600±29.36
ENSG00000197616 ENST00000356287 N/A N/A N/A 0.006±0.00 0.115±0.00 N/A N/A N/A N/A 2.071±0.00 N/A 0.048±0.00 0.148±0.12 0.359±0.30
ENST00000405093 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 21.706±0.00 0.037±0.00 0.311±0.00 0.255±0.00
ENST00000557461 0.018±0.00 N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040752 ENSMUST00000081857 0.064±0.02 0.062±0.04 0.039±0.00 0.112±0.00 0.098±0.04 0.046±0.02 1615.017±58.74 0.134±0.07 0.011±0.01 28.156±7.04 0.292±0.07 0.090±0.04 0.038±0.02 0.037±0.01
ENSMUST00000111456 N/A N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145322 0.015±0.01 N/A N/A N/A N/A 0.013±0.00 N/A 0.063±0.00 0.024±0.01 8.251±1.76 N/A 0.115±0.00 N/A N/A
ENSMUSG00000053093 ENSMUST00000102803 0.005±0.00 N/A 0.078±0.04 0.086±0.03 0.176±0.10 0.016±0.01 7.692±3.56 0.654±0.68 0.095±0.21 2.680±0.32 124.784±80.34 0.135±0.06 0.047±0.01 N/A
ENSMUST00000149852 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A 0.042±0.00 0.006±0.00 N/A
ENSMUST00000153783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168485 0.001±0.00 N/A N/A 0.109±0.00 0.007±0.00 0.005±0.00 10.364±1.46 0.344±0.32 0.005±0.00 0.842±0.39 N/A 0.159±0.08 0.011±0.00 0.140±0.00
ENSMUSG00000077928 ENSMUST00000104735 N/A N/A N/A N/A N/A N/A 61045.475±27552.28 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090889 ENSMUST00000085949 N/A N/A N/A N/A N/A N/A 8508.393±3549.36 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097652 ENSMUST00000181782 N/A N/A N/A 0.534±0.00 N/A N/A 24.617±1.49 0.045±0.00 N/A N/A N/A 0.397±0.01 0.083±0.00 N/A
ENSMUST00000185798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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