C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ domain containing RING finger 3b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000073869 pdzrn3b 7955 - 6:44175683-44333451 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000114330 pdzrn3b-001 44175683-44333451 protein_coding
  ENSDART00000157215 pdzrn3b-002 44186021-44211514 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000114330
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000114330 1.163±0.17 7.489±4.76 1.643±0.00 0.080±0.00 1.431±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JR CIL_0005JR_0002 CGP 6:44128648-44333451

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000121440 PDZRN3 PDZ domain containing ring finger 3 protein_coding Homo_sapiens
ENSMUSG00000035357 Pdzrn3 PDZ domain containing RING finger 3 protein_coding Mus_musculus

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