C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing RING finger 3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000114330 pdzrn3b-001 ENSDARG00000073869 7955 - 6:44175683-44333451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000114330
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000114330 1.163±0.17 7.489±4.76 1.643±0.00 0.080±0.00 1.431±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JR CIL_0005JR_0002 CGP 6:44128648-44333451

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075994 Pdzrn3-001 protein_coding Mus_musculus 0 424
ENST00000263666 PDZRN3-001 protein_coding Homo_sapiens 0 359
ENST00000462146 PDZRN3-005 protein_coding Homo_sapiens 0 359
ENST00000466780 PDZRN3-004 protein_coding Homo_sapiens 0 359
ENST00000479530 PDZRN3-006 protein_coding Homo_sapiens 0 359

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