C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arginine-glutamic acid dipeptide (RE) repeats a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077353 rerea 7955 + 23:23079517-23222665 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111345 rerea-201 23114113-23222665 protein_coding
  ENSDART00000135130 rerea-001 23167557-23220637 protein_coding
  ENSDART00000142085 rerea-002 23079517-23133090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000111345
Transcript ID Brain Heart Kidney Muscle
ENSDART00000111345 17.376±6.50 6.555±6.00 3.318±0.00 1.404±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MK CIL_0003MK_0001 CGP 23:22950619-23222665

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0031063 IMP regulation of histone deacetylation
GO:0040036 IGI regulation of fibroblast growth factor receptor signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0048839 IMP inner ear development
GO:0051216 IMP cartilage development
GO:0060037 IGI pharyngeal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000142599 RERE arginine-glutamic acid dipeptide (RE) repeats protein_coding Homo_sapiens
ENSMUSG00000039852 Rere arginine glutamic acid dipeptide (RE) repeats protein_coding Mus_musculus

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