C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003MK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022456-ENSDARG00000077353 CGP 7955 23:22950619-23222665
GeneTranscriptPositionBiotype
ENSDARG00000022456 (eno1a)
enolase 1a, (alpha) 		ENSDART00000009337 (eno1a-001) 22950619-22972140 protein_coding
ENSDART00000133322 (eno1a-002) 22950685-22968881 protein_coding
ENSDART00000138086 (eno1a-004) 22950656-22961285 retained_intron
ENSDART00000141498 (eno1a-005) 22968985-22971946 retained_intron
ENSDART00000148136 (eno1a-003) 22950687-22956680 retained_intron
ENSDARG00000077353 (rerea)
arginine-glutamic acid dipeptide (RE) repeats a 		ENSDART00000111345 (rerea-201) 23114113-23222665 protein_coding
ENSDART00000135130 (rerea-001) 23167557-23220637 protein_coding
ENSDART00000142085 (rerea-002) 23079517-23133090 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003MK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063524-ENSMUSG00000039852 CGP 10090 4:150236721-150621966
GeneTranscriptPositionBiotype
ENSMUSG00000039852 (Rere)
arginine glutamic acid dipeptide (RE) repeats 		ENSMUST00000105680 (Rere-003) 150488393-150621962 protein_coding
ENSMUST00000105682 (Rere-001) 150281646-150621966 protein_coding
ENSMUST00000129188 (Rere-002) 150281812-150282466 processed_transcript
ENSMUST00000131600 (Rere-008) 150406394-150470381 protein_coding
ENSMUST00000136646 (Rere-007) 150617266-150619828 protein_coding
ENSMUST00000137112 (Rere-005) 150569657-150612069 processed_transcript
ENSMUST00000142379 (Rere-004) 150569588-150570495 processed_transcript
ENSMUSG00000063524 (Eno1)
enolase 1, alpha non-neuron 		ENSMUST00000080149 (Eno1-002) 150243486-150248873 protein_coding
ENSMUST00000080926 (Eno1-001) 150236952-150248879 protein_coding
ENSMUST00000130632 (Eno1-003) 150237240-150242727 retained_intron
ENSMUST00000133789 (Eno1-007) 150246397-150247557 retained_intron
ENSMUST00000133839 (Eno1-006) 150237240-150245333 protein_coding
ENSMUST00000135063 (Eno1-010) 150244235-150246892 retained_intron
ENSMUST00000136310 (Eno1-011) 150247565-150248629 retained_intron
ENSMUST00000141931 (Eno1-005) 150237700-150242142 protein_coding
ENSMUST00000148605 (Eno1-009) 150237243-150239936 retained_intron
ENSMUST00000150175 (Eno1-004) 150236721-150244289 protein_coding
ENSMUST00000151057 (Eno1-008) 150247460-150248287 retained_intron
ENSMUSG00000085213 (Gm13091)
predicted gene 13091 		ENSMUST00000128800 (Gm13091-001) 150566869-150568544 antisense
ENSMUSG00000085787 (Gm13092)
predicted gene 13092 		ENSMUST00000136346 (Gm13092-001) 150315177-150315436 processed_pseudogene
ENSMUSG00000089292 (Gm23209)
predicted gene, 23209 		ENSMUST00000158667 (Gm23209-201) 150321193-150321302 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MK_0001ENSDARG00000022456ENSDART00000009337ENSDART00000133322ENSDART00000138086ENSDART00000141498ENSDART00000148136ENSDARG00000077353ENSDART00000111345ENSDART00000135130ENSDART00000142085CIL_0003MK_0002ENSMUSG00000039852ENSMUST00000105680ENSMUST00000105682ENSMUST00000129188ENSMUST00000131600ENSMUST00000136646ENSMUST00000137112ENSMUST00000142379ENSMUSG00000063524ENSMUST00000080149ENSMUST00000080926ENSMUST00000130632ENSMUST00000133789ENSMUST00000133839ENSMUST00000135063ENSMUST00000136310ENSMUST00000141931ENSMUST00000148605ENSMUST00000150175ENSMUST00000151057ENSMUSG00000085213ENSMUST00000128800ENSMUSG00000085787ENSMUST00000136346ENSMUSG00000089292ENSMUST00000158667
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MK_0001ENSDARG00000022456ENSDART00000009337ENSDART00000133322ENSDART00000141498ENSDART00000148136ENSDARG00000077353ENSDART00000111345CIL_0003MK_0002ENSMUSG00000039852ENSMUST00000105680ENSMUST00000105682ENSMUST00000136646ENSMUSG00000063524ENSMUST00000080149ENSMUST00000080926ENSMUST00000133839ENSMUST00000135063ENSMUST00000150175ENSMUSG00000085213ENSMUST00000128800ENSMUSG00000085787ENSMUST00000136346ENSMUSG00000089292ENSMUST00000158667
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022456 ENSDART00000009337 N/A N/A N/A 162.057±146.03 N/A N/A 194.657±95.97 10.539±9.30 1.964±0.00 N/A 103.410±0.00 N/A N/A N/A
ENSDART00000133322 N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A 43.187±0.00 N/A N/A N/A
ENSDART00000138086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141498 N/A N/A N/A 86.055±26.72 N/A N/A N/A 38.536±0.00 N/A N/A 47.277±0.00 N/A N/A N/A
ENSDART00000148136 N/A N/A N/A N/A N/A N/A 1.448±0.00 0.343±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000077353 ENSDART00000111345 N/A N/A N/A 17.376±6.50 N/A N/A 6.555±6.00 3.318±0.00 N/A N/A 1.404±0.00 N/A N/A N/A
ENSDART00000135130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039852 ENSMUST00000105680 7.972±1.89 13.698±3.61 10.554±6.93 9.016±4.02 9.647±2.85 10.017±1.40 3.184±1.34 13.143±1.62 1.645±1.04 8.807±1.34 10.017±4.56 5.888±4.09 5.197±0.84 2.867±0.54
ENSMUST00000105682 2.022±0.97 3.506±1.43 3.175±1.57 8.820±3.96 1.039±0.48 1.750±0.04 0.817±0.27 1.888±0.07 0.696±0.28 2.053±0.03 1.723±0.22 4.172±5.48 6.116±3.03 4.581±0.57
ENSMUST00000129188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.924±2.04 N/A
ENSMUST00000137112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063524 ENSMUST00000080149 N/A 110.120±47.12 N/A N/A N/A 22.898±2.90 N/A N/A 24.989±8.60 N/A N/A 66.951±0.00 N/A N/A
ENSMUST00000080926 254.127±93.61 146.961±42.64 137.343±9.18 151.223±3.39 192.797±87.25 138.764±26.30 44.837±13.03 283.678±14.14 127.159±39.37 58.478±12.92 10.566±4.03 111.242±36.19 173.738±114.22 63.628±6.52
ENSMUST00000130632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133839 76.179±0.83 N/A N/A N/A 136.033±0.00 N/A 30.545±3.78 N/A N/A N/A 16.636±6.08 62.068±4.36 N/A N/A
ENSMUST00000135063 N/A N/A N/A 365.914±0.00 N/A N/A N/A N/A N/A N/A N/A 241.494±0.00 300.101±114.85 121.214±0.00
ENSMUST00000136310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150175 N/A N/A N/A 2296.950±0.00 N/A N/A N/A N/A N/A N/A N/A 659.399±674.60 1440.464±1623.99 428.176±596.40
ENSMUST00000151057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085213 ENSMUST00000128800 N/A N/A 0.244±0.08 0.043±0.00 0.288±0.03 0.159±0.00 0.094±0.00 0.135±0.06 0.110±0.06 N/A N/A N/A 0.547±0.46 0.086±0.00
ENSMUSG00000085787 ENSMUST00000136346 2.043±0.64 2.272±0.92 0.339±0.02 1.070±0.00 3.406±1.39 1.967±1.24 1.261±0.57 3.734±2.48 0.757±0.66 4.075±1.00 N/A 5.965±4.94 0.564±0.00 3.781±1.04
ENSMUSG00000089292 ENSMUST00000158667 N/A N/A N/A N/A N/A N/A N/A N/A 23.874±0.00 N/A N/A 15.939±0.00 26.196±5.21 N/A

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