C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin, alpha 2, smooth muscle, aorta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079111 ACTC1 (2 of 2) 7955 + 25:14347722-14386175 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000109883 ACTC1 (2 of 2)-002 14370303-14386175 protein_coding
  ENSDART00000155770 ACTC1 (2 of 2)-001 14347722-14375673 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109883
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109883 2.169±1.16 4.108±2.59 17.090±0.00 0.056±0.00 188.679±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta protein_coding Homo_sapiens
ENSMUSG00000035783 Acta2 actin, alpha 2, smooth muscle, aorta protein_coding Mus_musculus

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