C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AT rich interactive domain 1Aa (SWI-like)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079879 arid1aa 7955 + 16:36261504-36402983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000084263 arid1aa-201 36369831-36402982 protein_coding
  ENSDART00000135930 arid1aa-001 36261504-36402983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000084263ENSDART00000135930
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000084263 7.381±4.15 1.926±1.95 4.057±0.00 0.847±0.00 2.907±0.00
ENSDART00000135930 N/A 0.213±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZO CIL_0001ZO_0001 CGP 16:36087312-36342062
CIL_0002JO CIL_0002JO_0001 CGP 16:36207345-36342062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding
GO:0005622 IEA intracellular

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117713 ARID1A AT rich interactive domain 1A (SWI-like) protein_coding Homo_sapiens
ENSMUSG00000007880 Arid1a AT rich interactive domain 1A (SWI-like) protein_coding Mus_musculus

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