C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006MV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087333-ENSDARG00000009315 CGP 7955 1:40955058-41000910
GeneTranscriptPositionBiotype
ENSDARG00000009315 (clgn)
calmegin 		ENSDART00000101671 (clgn-001) 40965275-41000910 protein_coding
ENSDARG00000087333 (scoca)
short coiled-coil protein a 		ENSDART00000122059 (scoca-001) 40955058-40962131 protein_coding
ENSDART00000135578 (scoca-003) 40959516-40961268 protein_coding
ENSDART00000137047 (scoca-002) 40959496-40961345 protein_coding
CIL_0006MV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153130-ENSG00000153132 CGP 9606 4:140257286-140427968
GeneTranscriptPositionBiotype
ENSG00000153130 (SCOC)
short coiled-coil protein 		ENST00000338517 (SCOC-002) 140343443-140382554 protein_coding
ENST00000394201 (SCOC-010) 140373643-140382525 protein_coding
ENST00000394203 (SCOC-201) 140343461-140382556 protein_coding
ENST00000394205 (SCOC-003) 140257286-140382556 protein_coding
ENST00000502535 (SCOC-007) 140376421-140381126 protein_coding
ENST00000506322 (SCOC-009) 140343601-140381280 protein_coding
ENST00000506597 (SCOC-004) 140373536-140382545 protein_coding
ENST00000510586 (SCOC-005) 140373649-140382549 protein_coding
ENST00000512749 (SCOC-006) 140373474-140381575 protein_coding
ENST00000608372 (SCOC-001) 140373510-140385726 protein_coding
ENST00000614192 (SCOC-202) 140373510-140382556 protein_coding
ENSG00000153132 (CLGN)
calmegin 		ENST00000325617 (CLGN-001) 140388455-140427968 protein_coding
ENST00000414773 (CLGN-201) 140388455-140427661 protein_coding
ENST00000509477 (CLGN-004) 140400512-140427610 protein_coding
ENSG00000196951 (SCOC-AS1)
SCOC antisense RNA 1 		ENST00000512692 (SCOC-AS1-001) 140283724-140373360 antisense
ENST00000608178 (SCOC-AS1-002) 140360682-140373381 antisense
ENST00000609616 (SCOC-AS1-003) 140360812-140373354 antisense
ENSG00000241923 (RPL14P3)
ribosomal protein L14 pseudogene 3 		ENST00000476715 (RPL14P3-001) 140366240-140366861 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MV_0001ENSDARG00000009315ENSDART00000101671ENSDARG00000087333ENSDART00000122059ENSDART00000135578ENSDART00000137047CIL_0006MV_0002ENSG00000153130ENST00000338517ENST00000394201ENST00000394203ENST00000394205ENST00000502535ENST00000506322ENST00000506597ENST00000510586ENST00000512749ENST00000608372ENST00000614192ENSG00000153132ENST00000325617ENST00000414773ENST00000509477ENSG00000196951ENST00000512692ENST00000608178ENST00000609616ENSG00000241923ENST00000476715
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MV_0001ENSDARG00000009315ENSDART00000101671ENSDARG00000087333ENSDART00000122059ENSDART00000135578ENSDART00000137047CIL_0006MV_0002ENSG00000153130ENST00000338517ENST00000394201ENST00000506597ENST00000608372ENST00000614192ENSG00000153132ENST00000325617ENST00000414773ENST00000509477ENSG00000196951ENST00000512692ENST00000608178ENST00000609616ENSG00000241923ENST00000476715
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009315 ENSDART00000101671 N/A N/A N/A 18.502±14.96 N/A N/A 10.416±4.71 7.888±0.00 0.545±0.00 N/A 5.686±0.00 N/A N/A N/A
ENSDARG00000087333 ENSDART00000122059 N/A N/A N/A N/A N/A N/A N/A 1.123±0.00 0.167±0.00 N/A N/A N/A N/A N/A
ENSDART00000135578 N/A N/A N/A N/A N/A N/A N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A
ENSDART00000137047 N/A N/A N/A 6.660±0.00 N/A N/A 2.734±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153130 ENST00000338517 N/A N/A N/A N/A N/A N/A N/A 14.834±0.00 N/A N/A 1.419±0.00 5.626±1.90 N/A N/A
ENST00000394201 5.933±0.00 4.082±0.00 4.935±0.00 15.067±5.75 2.888±0.00 4.527±0.58 9.432±5.44 7.185±3.82 4.834±0.40 7.803±0.22 3.106±0.00 6.506±3.96 8.158±0.45 2.515±0.00
ENST00000394203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506597 N/A 2.915±0.00 N/A 6.763±0.00 3.773±2.85 3.427±0.00 0.749±0.00 8.836±0.00 2.300±0.00 6.211±0.00 N/A N/A 1.624±0.00 N/A
ENST00000510586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608372 N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A
ENST00000614192 3.920±0.00 4.720±0.00 N/A 21.706±15.04 5.293±4.21 5.033±3.66 4.223±3.15 N/A 3.420±1.45 N/A 2.985±0.00 5.610±2.39 1.858±0.61 12.583±7.21
ENSG00000153132 ENST00000325617 0.259±0.00 N/A N/A 1.434±0.56 N/A 0.560±0.00 13.636±6.54 N/A 1.624±1.59 0.523±0.00 N/A 0.542±0.49 0.165±0.11 38.807±26.41
ENST00000414773 0.077±0.00 0.546±0.00 N/A N/A 0.109±0.00 0.506±0.44 4.522±0.00 0.146±0.00 N/A 0.619±0.00 0.101±0.00 N/A 0.025±0.00 15.148±6.29
ENST00000509477 N/A N/A N/A N/A N/A 0.179±0.00 N/A 0.316±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000196951 ENST00000512692 0.106±0.00 N/A 0.028±0.00 0.424±0.03 0.156±0.00 0.020±0.00 0.057±0.00 0.086±0.01 0.010±0.00 0.031±0.00 N/A 0.050±0.04 0.037±0.00 0.220±0.00
ENST00000608178 0.264±0.00 0.805±0.00 N/A 0.532±0.00 0.551±0.00 N/A 1.244±0.00 0.309±0.00 0.412±0.00 0.493±0.00 N/A 0.478±0.25 0.433±0.16 6.155±1.65
ENST00000609616 N/A N/A N/A N/A N/A 0.597±0.45 N/A N/A 0.174±0.00 N/A N/A 0.518±0.00 N/A 1.235±0.00
ENSG00000241923 ENST00000476715 0.258±0.00 0.253±0.00 0.256±0.00 0.118±0.01 0.179±0.00 0.179±0.03 0.145±0.06 0.203±0.00 0.200±0.00 0.274±0.15 0.285±0.00 0.104±0.00 0.099±0.00 0.428±0.13

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