C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079552-ENSDARG00000087333 CGP 7955 1:40726408-40962131
GeneTranscriptPositionBiotype
ENSDARG00000079552 (maml3)
mastermind-like 3 (Drosophila) 		ENSDART00000114659 (maml3-201) 40726408-40911858 protein_coding
ENSDART00000144135 (maml3-001) 40728678-40804462 protein_coding
ENSDARG00000087333 (scoca)
short coiled-coil protein a 		ENSDART00000122059 (scoca-001) 40955058-40962131 protein_coding
ENSDART00000135578 (scoca-003) 40959516-40961268 protein_coding
ENSDART00000137047 (scoca-002) 40959496-40961345 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00046O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196782-ENSG00000153130 CGP 9606 4:139716753-140385726
GeneTranscriptPositionBiotype
ENSG00000085871 (MGST2)
microsomal glutathione S-transferase 2 		ENST00000265498 (MGST2-001) 139665768-139704253 protein_coding
ENST00000502587 (MGST2-005) 139665997-139679124 retained_intron
ENST00000503816 (MGST2-002) 139666016-139731435 nonsense_mediated_decay
ENST00000506797 (MGST2-006) 139665835-139704224 protein_coding
ENST00000515067 (MGST2-004) 139666028-139704068 processed_transcript
ENST00000515137 (MGST2-003) 139665933-139740745 processed_transcript
ENST00000616265 (MGST2-201) 139665768-139740745 protein_coding
ENSG00000153130 (SCOC)
short coiled-coil protein 		ENST00000338517 (SCOC-002) 140343443-140382554 protein_coding
ENST00000394201 (SCOC-010) 140373643-140382525 protein_coding
ENST00000394203 (SCOC-201) 140343461-140382556 protein_coding
ENST00000394205 (SCOC-003) 140257286-140382556 protein_coding
ENST00000502535 (SCOC-007) 140376421-140381126 protein_coding
ENST00000506322 (SCOC-009) 140343601-140381280 protein_coding
ENST00000506597 (SCOC-004) 140373536-140382545 protein_coding
ENST00000510586 (SCOC-005) 140373649-140382549 protein_coding
ENST00000512749 (SCOC-006) 140373474-140381575 protein_coding
ENST00000608372 (SCOC-001) 140373510-140385726 protein_coding
ENST00000614192 (SCOC-202) 140373510-140382556 protein_coding
ENSG00000196951 (SCOC-AS1)
SCOC antisense RNA 1 		ENST00000512692 (SCOC-AS1-001) 140283724-140373360 antisense
ENST00000608178 (SCOC-AS1-002) 140360682-140373381 antisense
ENST00000609616 (SCOC-AS1-003) 140360812-140373354 antisense
ENSG00000241923 (RPL14P3)
ribosomal protein L14 pseudogene 3 		ENST00000476715 (RPL14P3-001) 140366240-140366861 processed_pseudogene
ENSG00000250698 (RP11-392B6.1)
 ENST00000509184 (RP11-392B6.1-002) 140128015-140134565 antisense
ENSG00000252233 (RN7SKP253)
RNA, 7SK small nuclear pseudogene 253 		ENST00000516424 (RN7SKP253-201) 139794125-139794433 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046O_0001ENSDARG00000079552ENSDART00000114659ENSDART00000144135ENSDARG00000087333ENSDART00000122059ENSDART00000135578ENSDART00000137047CIL_00046O_0002ENSG00000085871ENST00000265498ENST00000502587ENST00000503816ENST00000506797ENST00000515067ENST00000515137ENST00000616265ENSG00000153130ENST00000338517ENST00000394201ENST00000394203ENST00000394205ENST00000502535ENST00000506322ENST00000506597ENST00000510586ENST00000512749ENST00000608372ENST00000614192ENSG00000196951ENST00000512692ENST00000608178ENST00000609616ENSG00000241923ENST00000476715ENSG00000250698ENST00000509184ENSG00000252233ENST00000516424
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046O_0001ENSDARG00000079552ENSDART00000114659ENSDART00000144135ENSDARG00000087333ENSDART00000122059ENSDART00000135578ENSDART00000137047CIL_00046O_0002ENSG00000085871ENST00000265498ENST00000506797ENST00000515067ENSG00000153130ENST00000338517ENST00000394201ENST00000506597ENST00000608372ENST00000614192ENSG00000196951ENST00000512692ENST00000608178ENST00000609616ENSG00000241923ENST00000476715ENSG00000250698ENST00000509184ENSG00000252233ENST00000516424
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079552 ENSDART00000114659 N/A N/A N/A 5.978±2.22 N/A N/A 1.587±0.48 1.400±1.03 0.157±0.00 N/A 1.221±0.00 N/A N/A N/A
ENSDART00000144135 N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A 0.228±0.00 N/A N/A N/A
ENSDARG00000087333 ENSDART00000122059 N/A N/A N/A N/A N/A N/A N/A 1.123±0.00 0.167±0.00 N/A N/A N/A N/A N/A
ENSDART00000135578 N/A N/A N/A N/A N/A N/A N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A
ENSDART00000137047 N/A N/A N/A 6.660±0.00 N/A N/A 2.734±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085871 ENST00000265498 43.165±0.00 44.720±0.00 N/A 3.878±1.05 29.001±0.00 27.642±19.30 20.634±15.57 31.090±3.48 40.648±36.82 9.505±5.60 3.961±2.03 22.311±9.64 41.309±23.65 25.670±18.67
ENST00000502587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506797 N/A N/A 4.485±0.00 3.355±0.00 5.930±0.00 N/A 22.893±0.00 N/A N/A 12.105±0.00 3.914±0.00 36.095±0.00 13.436±0.00 19.718±0.00
ENST00000515067 N/A N/A N/A N/A N/A N/A N/A N/A 36.112±0.00 N/A 4.393±1.36 N/A N/A N/A
ENST00000515137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153130 ENST00000338517 N/A N/A N/A N/A N/A N/A N/A 14.834±0.00 N/A N/A 1.419±0.00 5.626±1.90 N/A N/A
ENST00000394201 5.933±0.00 4.082±0.00 4.935±0.00 15.067±5.75 2.888±0.00 4.527±0.58 9.432±5.44 7.185±3.82 4.834±0.40 7.803±0.22 3.106±0.00 6.506±3.96 8.158±0.45 2.515±0.00
ENST00000394203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506597 N/A 2.915±0.00 N/A 6.763±0.00 3.773±2.85 3.427±0.00 0.749±0.00 8.836±0.00 2.300±0.00 6.211±0.00 N/A N/A 1.624±0.00 N/A
ENST00000510586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608372 N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A
ENST00000614192 3.920±0.00 4.720±0.00 N/A 21.706±15.04 5.293±4.21 5.033±3.66 4.223±3.15 N/A 3.420±1.45 N/A 2.985±0.00 5.610±2.39 1.858±0.61 12.583±7.21
ENSG00000196951 ENST00000512692 0.106±0.00 N/A 0.028±0.00 0.424±0.03 0.156±0.00 0.020±0.00 0.057±0.00 0.086±0.01 0.010±0.00 0.031±0.00 N/A 0.050±0.04 0.037±0.00 0.220±0.00
ENST00000608178 0.264±0.00 0.805±0.00 N/A 0.532±0.00 0.551±0.00 N/A 1.244±0.00 0.309±0.00 0.412±0.00 0.493±0.00 N/A 0.478±0.25 0.433±0.16 6.155±1.65
ENST00000609616 N/A N/A N/A N/A N/A 0.597±0.45 N/A N/A 0.174±0.00 N/A N/A 0.518±0.00 N/A 1.235±0.00
ENSG00000241923 ENST00000476715 0.258±0.00 0.253±0.00 0.256±0.00 0.118±0.01 0.179±0.00 0.179±0.03 0.145±0.06 0.203±0.00 0.200±0.00 0.274±0.15 0.285±0.00 0.104±0.00 0.099±0.00 0.428±0.13
ENSG00000250698 ENST00000509184 0.151±0.00 N/A N/A 0.368±0.00 0.095±0.00 N/A 0.054±0.02 N/A 0.050±0.00 N/A N/A 0.024±0.00 N/A 0.141±0.12
ENSG00000252233 ENST00000516424 N/A N/A N/A N/A 0.503±0.00 1.155±0.00 N/A N/A 1.067±0.95 N/A N/A N/A N/A N/A

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