C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine palmitoyltransferase, small subunit B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000091658 sptssb 7955 - 15:1675168-1682410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000126456 sptssb-201 1677754-1677987 protein_coding
  ENSDART00000155579 sptssb-001 1675168-1682410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000155579
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000155579 2.958±0.80 0.467±0.35 0.203±0.09 0.021±0.00 0.563±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K1 CIL_0004K1_0001 CGP 15:1648985-1682410
CIL_00049N CIL_00049N_0001 CGP 15:1675168-1706678

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004758 ISS serine C-palmitoyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006629 IEA lipid metabolic process
GO:0006665 IEA sphingolipid metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0017059 ISS serine C-palmitoyltransferase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196542 SPTSSB serine palmitoyltransferase, small subunit B protein_coding Homo_sapiens
ENSMUSG00000043461 Sptssb serine palmitoyltransferase, small subunit B protein_coding Mus_musculus

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