C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091658-ENSDARG00000058960 CGP 7955 15:1675168-1706678
GeneTranscriptPositionBiotype
ENSDARG00000058960 (OTOL1 (2 of 2))
otolin 1 		ENSDART00000081940 (OTOL1 (2 of 2)-001) 1700373-1706678 protein_coding
CIL_00049N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196542-ENSG00000182447 CGP 9606 3:161344792-161503942
GeneTranscriptPositionBiotype
ENSG00000182447 (OTOL1)
otolin 1 		ENST00000327928 (OTOL1-001) 161496808-161503942 protein_coding
ENSG00000196542 (SPTSSB)
serine palmitoyltransferase, small subunit B 		ENST00000359175 (SPTSSB-001) 161344792-161372880 protein_coding
ENST00000497137 (SPTSSB-003) 161345775-161371501 protein_coding
ENST00000497374 (SPTSSB-002) 161359299-161371517 retained_intron
ENST00000617024 (SPTSSB-201) 161371530-161372821 protein_coding
ENST00000620149 (SPTSSB-202) 161346093-161346323 protein_coding
ENSG00000234851 (RP11-3P17.3)
 ENST00000471152 (RP11-3P17.3-001) 161429127-161429597 processed_pseudogene
ENSG00000240567 (RP11-3P17.4)
 ENST00000473595 (RP11-3P17.4-001) 161426427-161448242 lincRNA
ENSG00000269888 (RP11-3P17.5)
 ENST00000602890 (RP11-3P17.5-001) 161429112-161429613 lincRNA
CIL_00049N_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043461-ENSMUSG00000027788 CGP 10090 3:69819538-70028708
GeneTranscriptPositionBiotype
ENSMUSG00000027788 (Otol1)
otolin 1 homolog (zebrafish) 		ENSMUST00000053013 (Otol1-001) 70007613-70028708 protein_coding
ENSMUSG00000043461 (Sptssb)
serine palmitoyltransferase, small subunit B 		ENSMUST00000051239 (Sptssb-201) 69819538-69859896 protein_coding
ENSMUST00000171529 (Sptssb-202) 69819538-69859896 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049N_0001ENSDARG00000058960ENSDART00000081940CIL_00049N_0002ENSG00000182447ENST00000327928ENSG00000196542ENST00000359175ENST00000497137ENST00000497374ENST00000617024ENST00000620149ENSG00000234851ENST00000471152ENSG00000240567ENST00000473595ENSG00000269888ENST00000602890CIL_00049N_0003ENSMUSG00000027788ENSMUST00000053013ENSMUSG00000043461ENSMUST00000051239ENSMUST00000171529
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049N_0001ENSDARG00000058960ENSDART00000081940CIL_00049N_0002ENSG00000182447ENST00000327928ENSG00000196542ENST00000359175ENST00000497137ENST00000497374ENST00000617024ENSG00000234851ENST00000471152ENSG00000240567ENST00000473595ENSG00000269888ENST00000602890CIL_00049N_0003ENSMUSG00000027788ENSMUST00000053013ENSMUSG00000043461ENSMUST00000051239ENSMUST00000171529
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058960 ENSDART00000081940 N/A N/A N/A 0.283±0.39 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182447 ENST00000327928 N/A N/A N/A 0.139±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENSG00000196542 ENST00000359175 0.014±0.00 0.270±0.00 0.195±0.00 3.001±1.11 0.162±0.04 0.081±0.00 0.045±0.04 0.399±0.00 1.096±1.07 0.047±0.00 N/A 0.109±0.01 0.051±0.04 0.029±0.00
ENST00000497137 N/A 0.122±0.00 N/A N/A 0.254±0.00 N/A N/A 0.600±0.00 1.770±0.00 0.200±0.00 N/A 0.297±0.00 0.222±0.00 0.041±0.00
ENST00000497374 N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000617024 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A N/A 0.162±0.00 N/A
ENST00000620149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234851 ENST00000471152 N/A N/A 2.723±0.00 3.905±0.00 6.875±0.00 7.606±0.00 3.382±0.00 4.541±0.00 12.390±0.00 5.498±0.00 2.521±0.00 6.994±4.53 N/A N/A
ENSG00000240567 ENST00000473595 1.038±0.00 1.242±0.00 N/A 0.226±0.00 0.512±0.00 0.917±0.00 0.340±0.00 0.232±0.08 0.313±0.00 0.764±0.00 0.927±0.00 0.046±0.00 N/A 0.400±0.26
ENSG00000269888 ENST00000602890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.740±0.00 47.399±4.59 33.204±5.68 15.962±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027788 ENSMUST00000053013 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.23 0.007±0.00
ENSMUSG00000043461 ENSMUST00000051239 2.459±0.31 0.387±0.21 161.027±62.07 0.076±0.01 0.203±0.00 31.034±13.24 0.035±0.01 3.513±0.48 0.173±0.08 7.715±6.88 N/A 0.139±0.13 0.067±0.04 0.059±0.00
ENSMUST00000171529 N/A N/A 37.436±7.15 0.196±0.00 N/A 4.632±1.04 N/A 0.603±0.21 N/A N/A N/A 0.003±0.00 N/A N/A

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