C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: orthodenticle homolog 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000094992 otx1b 7955 + 17:24146910-24152572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000064083 otx1b-001 24146910-24152572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000064083
Transcript ID Brain Kidney Liver Muscle
ENSDART00000064083 8.928±2.62 11.423±5.27 0.536±0.00 0.620±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RR CIL_0000RR_0001 CGP 17:23937169-24152572
CIL_0007MW CIL_0007MW_0005 UCNEbase 17:24068085-24218460
CIL_000100 CIL_000100_0001 CGP 17:24146910-24267829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003406 IGI retinal pigment epithelium development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0042472 IMP inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115507 OTX1 orthodenticle homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000005917 Otx1 orthodenticle homolog 1 protein_coding Mus_musculus

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