C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome P450, family 26, subfamily B, polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000003137 CYP26B1 9606 - 2:72129238-72148038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000001146 CYP26B1-001 72129238-72148038 protein_coding
  ENST00000412253 CYP26B1-002 72129393-72143084 protein_coding
  ENST00000461519 CYP26B1-004 72135280-72144415 protein_coding
  ENST00000474509 CYP26B1-003 72134851-72147862 protein_coding
  ENST00000546307 CYP26B1-201 72129238-72147862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000001146ENST00000412253ENST00000461519ENST00000546307
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000001146 17.770±0.00 2.949±0.00 0.367±0.00 2.429±1.04 2.931±2.54 2.493±0.00 0.349±0.25 11.290±0.00 0.247±0.00 N/A 0.872±0.00 2.807±1.74 8.067±5.85
ENST00000412253 16.245±0.00 4.460±0.00 N/A 1.259±0.00 5.677±0.00 0.938±0.88 N/A N/A N/A 2.843±0.00 1.029±1.17 1.311±0.76 6.424±0.00
ENST00000461519 N/A N/A N/A N/A 0.531±0.00 0.139±0.00 0.732±0.00 N/A N/A N/A N/A N/A N/A
ENST00000546307 N/A 0.994±0.00 N/A 0.975±0.25 N/A N/A N/A N/A 0.812±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BT CIL_0003BT_0001 CGP 2:71453722-72148038
CIL_0003EG CIL_0003EG_0001 CGP 2:72129238-72826041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001709 ISS cell fate determination
GO:0001972 IDA retinoic acid binding
GO:0005506 IEA iron ion binding
GO:0005737 IDA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006766 TAS vitamin metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0007140 ISS male meiosis
GO:0007283 ISS spermatogenesis
GO:0008401 IDA retinoic acid 4-hydroxylase activity
GO:0009954 ISS proximal/distal pattern formation
GO:0010628 IEA positive regulation of gene expression
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA:NAS heme binding
GO:0030326 ISS embryonic limb morphogenesis
GO:0034653 IDA retinoic acid catabolic process
GO:0042573 IEA retinoic acid metabolic process
GO:0043587 IEA tongue morphogenesis
GO:0044281 TAS small molecule metabolic process
GO:0048384 IEA retinoic acid receptor signaling pathway
GO:0048387 TAS negative regulation of retinoic acid receptor signaling pathway
GO:0055114 IEA:IDA oxidation-reduction process
GO:0060349 IMP bone morphogenesis
GO:0061436 IEA establishment of skin barrier
GO:0070268 IEA cornification
GO:0071300 IEA cellular response to retinoic acid
GO:2001037 IEA positive regulation of tongue muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077121 cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 protein_coding Danio_rerio
ENSMUSG00000063415 Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 protein_coding Mus_musculus

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