C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 26, subfamily B, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546307 CYP26B1-201 ENSG00000003137 9606 - 2:72129238-72147862 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungENST00000546307
Transcript ID Adrenal Brain Lung
ENST00000546307 0.994±0.00 0.975±0.25 0.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BT CIL_0003BT_0001 CGP 2:71453722-72148038
CIL_0003EG CIL_0003EG_0001 CGP 2:72129238-72826041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001709 ISS cell fate determination
GO:0001972 IDA retinoic acid binding
GO:0005506 IEA iron ion binding
GO:0005737 IDA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006766 TAS vitamin metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0007140 ISS male meiosis
GO:0007283 ISS spermatogenesis
GO:0008401 IDA retinoic acid 4-hydroxylase activity
GO:0009954 ISS proximal/distal pattern formation
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA:NAS heme binding
GO:0030326 ISS embryonic limb morphogenesis
GO:0034653 IDA retinoic acid catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048387 TAS negative regulation of retinoic acid receptor signaling pathway
GO:0055114 IEA:IDA oxidation-reduction process
GO:0060349 IMP bone morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077705 Cyp26b1-201 protein_coding Mus_musculus 0 1341
ENSMUST00000168003 Cyp26b1-202 protein_coding Mus_musculus 0 1341

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