C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000003137-ENSG00000144036 CGP 9606 2:72129238-72826041
GeneTranscriptPositionBiotype
ENSG00000003137 (CYP26B1)
cytochrome P450, family 26, subfamily B, polypeptide 1 		ENST00000001146 (CYP26B1-001) 72129238-72148038 protein_coding
ENST00000412253 (CYP26B1-002) 72129393-72143084 protein_coding
ENST00000461519 (CYP26B1-004) 72135280-72144415 protein_coding
ENST00000474509 (CYP26B1-003) 72134851-72147862 protein_coding
ENST00000546307 (CYP26B1-201) 72129238-72147862 protein_coding
ENSG00000144036 (EXOC6B)
exocyst complex component 6B 		ENST00000272427 (EXOC6B-001) 72175984-72826041 protein_coding
ENST00000410104 (EXOC6B-003) 72461476-72826041 protein_coding
ENST00000410112 (EXOC6B-002) 72496454-72826005 nonsense_mediated_decay
ENST00000464347 (EXOC6B-005) 72379809-72495539 processed_transcript
ENST00000471335 (EXOC6B-006) 72179129-72335289 processed_transcript
ENST00000485398 (EXOC6B-004) 72499928-72515754 processed_transcript
ENST00000490919 (EXOC6B-007) 72179015-72354278 processed_transcript
ENST00000492257 (EXOC6B-008) 72179173-72263437 processed_transcript
ENSG00000212378 (SNORD78)
Small nucleolar RNA SNORD78 		ENST00000391076 (SNORD78.1-202) 72760534-72760602 snoRNA
ENSG00000222536 (RNU2-39P)
RNA, U2 small nuclear 39, pseudogene 		ENST00000410604 (RNU2-39P-201) 72721806-72722003 snRNA
ENSG00000228568 (AC006461.2)
 ENST00000412637 (AC006461.2-001) 72288785-72289110 processed_pseudogene
ENSG00000276288 (AC006461.1)
 ENST00000408240 (AC006461.1-201) 72170559-72170645 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003EG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063415-ENSMUSG00000033769 CGP 10090 6:84571414-85069513
GeneTranscriptPositionBiotype
ENSMUSG00000063415 (Cyp26b1)
cytochrome P450, family 26, subfamily b, polypeptide 1 		ENSMUST00000077705 (Cyp26b1-201) 84571414-84593810 protein_coding
ENSMUST00000168003 (Cyp26b1-202) 84571414-84593908 protein_coding
ENSMUSG00000088849 (Gm26353)
predicted gene, 26353 		ENSMUST00000158224 (Gm26353-201) 85066183-85066437 misc_RNA
ENSMUSG00000098142 (Gm7507)
predicted gene 7507 		ENSMUST00000183053 (Gm7507-001) 84812240-84813247 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EG_0001ENSG00000003137ENST00000001146ENST00000412253ENST00000461519ENST00000474509ENST00000546307ENSG00000144036ENST00000272427ENST00000410104ENST00000410112ENST00000464347ENST00000471335ENST00000485398ENST00000490919ENST00000492257ENSG00000212378ENST00000391076ENSG00000222536ENST00000410604ENSG00000228568ENST00000412637ENSG00000276288ENST00000408240CIL_0003EG_0002ENSMUSG00000063415ENSMUST00000077705ENSMUST00000168003ENSMUSG00000088849ENSMUST00000158224ENSMUSG00000098142ENSMUST00000183053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EG_0001ENSG00000003137ENST00000001146ENST00000412253ENST00000461519ENST00000546307ENSG00000144036ENST00000272427ENST00000410104ENST00000410112ENSG00000212378ENST00000391076ENSG00000222536ENST00000410604ENSG00000228568ENST00000412637ENSG00000276288ENST00000408240CIL_0003EG_0002ENSMUSG00000063415ENSMUST00000077705ENSMUST00000168003ENSMUSG00000088849ENSMUST00000158224ENSMUSG00000098142ENSMUST00000183053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003137 ENST00000001146 17.770±0.00 2.949±0.00 0.367±0.00 2.429±1.04 2.931±2.54 2.493±0.00 0.349±0.25 11.290±0.00 N/A 0.247±0.00 N/A 0.872±0.00 2.807±1.74 8.067±5.85
ENST00000412253 16.245±0.00 4.460±0.00 N/A 1.259±0.00 5.677±0.00 0.938±0.88 N/A N/A N/A N/A 2.843±0.00 1.029±1.17 1.311±0.76 6.424±0.00
ENST00000461519 N/A N/A N/A N/A 0.531±0.00 0.139±0.00 0.732±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000474509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546307 N/A 0.994±0.00 N/A 0.975±0.25 N/A N/A N/A N/A N/A 0.812±0.00 N/A N/A N/A N/A
ENSG00000144036 ENST00000272427 5.017±0.00 1.126±0.00 2.543±0.00 10.711±0.68 4.300±0.09 3.273±1.17 12.016±5.21 1.482±0.28 3.824±3.25 3.099±0.66 1.526±0.98 3.822±3.05 4.790±2.89 3.185±0.38
ENST00000410104 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A N/A N/A
ENST00000410112 N/A N/A N/A 35.030±0.00 N/A N/A 15.283±0.00 3.318±0.00 N/A N/A 4.917±0.00 10.450±0.00 N/A N/A
ENST00000464347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212378 ENST00000391076 N/A N/A N/A N/A N/A N/A N/A 0.383±0.00 2.350±0.00 N/A N/A N/A N/A N/A
ENSG00000222536 ENST00000410604 N/A N/A N/A 0.161±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228568 ENST00000412637 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 N/A 0.197±0.07 N/A N/A
ENSG00000276288 ENST00000408240 0.656±0.00 N/A N/A N/A 2.493±0.00 N/A 0.341±0.00 N/A N/A 2.204±0.00 N/A N/A N/A 0.661±0.35
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000063415 ENSMUST00000077705 N/A 0.939±1.16 N/A N/A 0.361±0.11 0.371±0.03 N/A 0.243±0.13 0.853±0.74 0.947±0.59 N/A 0.893±0.21 0.530±0.45 N/A
ENSMUST00000168003 0.661±0.17 N/A N/A 6.189±3.80 0.468±0.00 N/A 2.099±1.40 0.115±0.00 0.059±0.03 N/A 0.650±0.21 0.662±0.00 1.123±0.78 2.111±0.59
ENSMUSG00000088849 ENSMUST00000158224 0.470±0.00 N/A 0.186±0.00 0.292±0.08 N/A 1.448±0.00 0.332±0.00 0.323±0.00 0.388±0.29 0.664±0.20 N/A N/A 0.268±0.00 0.713±0.00
ENSMUSG00000098142 ENSMUST00000183053 0.251±0.10 0.114±0.03 0.066±0.00 0.239±0.09 0.185±0.17 0.080±0.03 0.064±0.00 0.056±0.02 0.045±0.03 0.202±0.00 0.079±0.03 0.241±0.17 0.068±0.02 0.037±0.01

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