C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MYC binding protein 2, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612956 MYCBP2-202 ENSG00000005810 9606 - 13:77044660-77058334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverLungOvaryPlacentaTestisENST00000612956
Transcript ID Adrenal Brain Kidney Liver Lung Ovary Placenta Testis
ENST00000612956 8.397±0.00 11.006±0.00 4.926±0.00 2.346±0.00 3.232±0.00 5.477±1.55 2.621±0.04 8.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004B CIL_00004B_0001 CGP 13:76992598-77327050
CIL_0004PP CIL_0004PP_0002 CGP 13:77044655-77645263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160758 Mycbp2-006 protein_coding Mus_musculus 0 1978
ENSMUST00000161008 Mycbp2-003 protein_coding Mus_musculus 0 1978
ENSMUST00000159855 Mycbp2-001 protein_coding Mus_musculus 0 1978
ENSDART00000124901 mycbp2-201 protein_coding Danio_rerio 2e-31 141
ENSDART00000039157 mycbp2-001 protein_coding Danio_rerio 2e-31 141

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