C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptophysin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008282 SYPL1 9606 - 7:106090503-106112576 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000011473 SYPL1-001 106090505-106112576 protein_coding
  ENST00000455385 SYPL1-002 106090503-106112331 protein_coding
  ENST00000460770 SYPL1-007 106091699-106093252 retained_intron
  ENST00000464029 SYPL1-005 106091407-106097862 protein_coding
  ENST00000470347 SYPL1-004 106091457-106112221 protein_coding
  ENST00000483448 SYPL1-003 106111832-106112576 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000011473ENST00000455385ENST00000460770ENST00000464029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000011473 4.763±0.00 N/A N/A 2.578±0.00 5.612±0.00 N/A N/A 3.751±0.00 N/A N/A N/A 10.226±4.57 3.778±0.00 37.195±9.43
ENST00000455385 30.153±0.00 39.970±0.00 6.713±0.00 10.947±7.71 14.135±9.38 24.574±20.20 16.405±11.86 49.066±0.00 10.644±2.06 20.612±13.35 28.665±27.67 28.603±9.92 30.543±3.13 8.473±0.00
ENST00000460770 N/A N/A N/A 4.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.221±0.00
ENST00000464029 N/A N/A 3.307±0.00 1.288±0.00 3.715±0.00 2.862±0.00 N/A N/A 6.145±0.00 N/A 3.235±0.00 8.443±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005887 TAS integral component of plasma membrane
GO:0006810 IEA transport
GO:0007268 TAS synaptic transmission
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 TAS integral component of membrane
GO:0030141 IEA secretory granule
GO:0030285 IBA integral component of synaptic vesicle membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077356 sypl1 synaptophysin-like 1 protein_coding Danio_rerio
ENSMUSG00000020570 Sypl synaptophysin-like protein protein_coding Mus_musculus

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