C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000013561 RNF14 9606 + 5:141958328-141990291 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000347642 RNF14-201 141968886-141990290 protein_coding
  ENST00000356143 RNF14-202 141966837-141990290 protein_coding
  ENST00000394514 RNF14-002 141969111-141989185 protein_coding
  ENST00000394519 RNF14-203 141966837-141990290 protein_coding
  ENST00000394520 RNF14-001 141969039-141990291 protein_coding
  ENST00000502341 RNF14-009 141969104-141978762 processed_transcript
  ENST00000506004 RNF14-008 141969269-141973634 protein_coding
  ENST00000506822 RNF14-004 141958337-141978394 protein_coding
  ENST00000506938 RNF14-010 141969105-141978509 protein_coding
  ENST00000507163 RNF14-006 141969157-141978553 protein_coding
  ENST00000507291 RNF14-007 141969277-141974833 protein_coding
  ENST00000511961 RNF14-003 141958328-141978830 protein_coding
  ENST00000512565 RNF14-013 141969136-141984933 protein_coding
  ENST00000513019 RNF14-005 141966820-141974947 protein_coding
  ENST00000514620 RNF14-011 141969095-141980277 processed_transcript
  ENST00000515613 RNF14-012 141969151-141983552 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000347642ENST00000356143ENST00000394514ENST00000394520ENST00000506938ENST00000507163ENST00000515613
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000347642 N/A 1.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356143 N/A N/A N/A N/A N/A N/A N/A 0.802±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394514 6.460±0.00 5.091±0.00 5.307±0.00 6.686±4.09 5.390±1.31 4.033±1.54 8.120±1.15 5.603±0.16 4.374±2.44 4.189±0.00 3.707±0.43 4.837±2.31 13.478±4.48 22.571±17.14
ENST00000394520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.124±0.00 N/A N/A
ENST00000506938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.343±1.30 N/A N/A N/A
ENST00000507163 N/A N/A N/A N/A N/A N/A N/A 6.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000515613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.037±0.00 41.929±0.00 108.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QF CIL_0006QF_0001 CGP 5:141923808-141969741
CIL_0006QG CIL_0006QG_0001 CGP 5:141943585-141990291
CIL_0006Q5 CIL_0006Q5_0001 CGP 5:141958328-142013041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019787 IDA small conjugating protein ligase activity
GO:0030521 NAS androgen receptor signaling pathway
GO:0032355 IDA response to estradiol
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0050681 IPI androgen receptor binding
GO:0060765 IDA regulation of androgen receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002794 RNF14 (1 of 5) ring finger protein 14 protein_coding Danio_rerio
ENSDARG00000043905 rnf14 ring finger protein 14 protein_coding Danio_rerio
ENSDARG00000078683 RNF14 (3 of 5) ring finger protein 14 protein_coding Danio_rerio
ENSDARG00000090710 RNF14 (4 of 5) ring finger protein 14 protein_coding Danio_rerio
ENSDARG00000091727 RNF14 (5 of 5) ring finger protein 14 protein_coding Danio_rerio
ENSMUSG00000060450 Rnf14 ring finger protein 14 protein_coding Mus_musculus

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