C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394514 RNF14-002 ENSG00000013561 9606 + 5:141969111-141989185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394514 6.460±0.00 5.091±0.00 5.307±0.00 6.686±4.09 5.390±1.31 4.033±1.54 8.120±1.15 5.603±0.16 4.374±2.44 4.189±0.00 3.707±0.43 4.837±2.31 13.478±4.48 22.571±17.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QF CIL_0006QF_0001 CGP 5:141923808-141969741
CIL_0006QG CIL_0006QG_0001 CGP 5:141943585-141990291
CIL_0006Q5 CIL_0006Q5_0001 CGP 5:141958328-142013041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019787 IDA small conjugating protein ligase activity
GO:0030521 NAS androgen receptor signaling pathway
GO:0032355 IDA response to estradiol
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0050681 IPI androgen receptor binding
GO:0060765 IDA regulation of androgen receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170811 Rnf14-202 protein_coding Mus_musculus 0 1467
ENSMUST00000072376 Rnf14-201 protein_coding Mus_musculus 0 1216
ENSMUST00000171461 Rnf14-203 protein_coding Mus_musculus 0 1216

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