C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006Q5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000013561-ENSG00000113552 CGP 9606 5:141958328-142013041
GeneTranscriptPositionBiotype
ENSG00000013561 (RNF14)
ring finger protein 14
ENST00000347642 (RNF14-201) 141968886-141990290 protein_coding
ENST00000356143 (RNF14-202) 141966837-141990290 protein_coding
ENST00000394514 (RNF14-002) 141969111-141989185 protein_coding
ENST00000394519 (RNF14-203) 141966837-141990290 protein_coding
ENST00000394520 (RNF14-001) 141969039-141990291 protein_coding
ENST00000502341 (RNF14-009) 141969104-141978762 processed_transcript
ENST00000506004 (RNF14-008) 141969269-141973634 protein_coding
ENST00000506822 (RNF14-004) 141958337-141978394 protein_coding
ENST00000506938 (RNF14-010) 141969105-141978509 protein_coding
ENST00000507163 (RNF14-006) 141969157-141978553 protein_coding
ENST00000507291 (RNF14-007) 141969277-141974833 protein_coding
ENST00000511961 (RNF14-003) 141958328-141978830 protein_coding
ENST00000512565 (RNF14-013) 141969136-141984933 protein_coding
ENST00000513019 (RNF14-005) 141966820-141974947 protein_coding
ENST00000514620 (RNF14-011) 141969095-141980277 processed_transcript
ENST00000515613 (RNF14-012) 141969151-141983552 nonsense_mediated_decay
ENSG00000113552 (GNPDA1)
glucosamine-6-phosphate deaminase 1
ENST00000311337 (GNPDA1-001) 142000669-142013031 protein_coding
ENST00000500692 (GNPDA1-002) 142000674-142013030 protein_coding
ENST00000503229 (GNPDA1-007) 142005112-142013027 protein_coding
ENST00000503794 (GNPDA1-004) 142000678-142012973 protein_coding
ENST00000504139 (GNPDA1-014) 142002086-142013031 protein_coding
ENST00000504424 (GNPDA1-008) 142011949-142012996 protein_coding
ENST00000505689 (GNPDA1-012) 142002090-142013041 protein_coding
ENST00000507107 (GNPDA1-009) 142006036-142013027 retained_intron
ENST00000507559 (GNPDA1-010) 142004875-142006314 retained_intron
ENST00000508177 (GNPDA1-003) 142000678-142012794 protein_coding
ENST00000510194 (GNPDA1-006) 142005044-142012996 protein_coding
ENST00000513454 (GNPDA1-013) 141991749-142013027 protein_coding
ENST00000515747 (GNPDA1-011) 142003218-142005441 retained_intron
ENSG00000113555 (PCDH12)
protocadherin 12
ENST00000231484 (PCDH12-001) 141943585-141959062 protein_coding
ENST00000510041 (PCDH12-003) 141957781-141958812 protein_coding
ENST00000512221 (PCDH12-004) 141958037-141969741 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0006Q5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060450-ENSMUSG00000052102 CGP 10090 18:38296635-38339003
GeneTranscriptPositionBiotype
ENSMUSG00000052102 (Gnpda1)
glucosamine-6-phosphate deaminase 1
ENSMUST00000063814 (Gnpda1-001) 38327558-38339003 protein_coding
ENSMUST00000129062 (Gnpda1-004) 38333097-38335078 retained_intron
ENSMUST00000139885 (Gnpda1-002) 38333189-38338909 protein_coding
ENSMUST00000153291 (Gnpda1-003) 38328683-38332070 processed_transcript
ENSMUSG00000060450 (Rnf14)
ring finger protein 14
ENSMUST00000072376 (Rnf14-201) 38296635-38317847 protein_coding
ENSMUST00000170811 (Rnf14-202) 38296635-38317847 protein_coding
ENSMUST00000171461 (Rnf14-203) 38296805-38317847 protein_coding
ENSMUSG00000089296 (Gm23205)
predicted gene, 23205
ENSMUST00000158671 (Gm23205-201) 38297939-38298041 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q5_0001ENSG00000013561ENST00000347642ENST00000356143ENST00000394514ENST00000394520ENST00000506938ENST00000507163ENST00000515613ENSG00000113552ENST00000311337ENST00000500692ENST00000504139ENST00000507107ENST00000508177ENSG00000113555ENST00000231484CIL_0006Q5_0002ENSMUSG00000052102ENSMUST00000063814ENSMUST00000153291ENSMUSG00000060450ENSMUST00000072376ENSMUST00000170811ENSMUST00000171461ENSMUSG00000089296ENSMUST00000158671
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013561 ENST00000347642 N/A 1.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356143 N/A N/A N/A N/A N/A N/A N/A 0.802±0.00 N/A N/A N/A N/A N/A N/A
ENST00000394514 6.460±0.00 5.091±0.00 5.307±0.00 6.686±4.09 5.390±1.31 4.033±1.54 8.120±1.15 5.603±0.16 4.374±2.44 4.189±0.00 3.707±0.43 4.837±2.31 13.478±4.48 22.571±17.14
ENST00000394519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.124±0.00 N/A N/A
ENST00000502341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.343±1.30 N/A N/A N/A
ENST00000507163 N/A N/A N/A N/A N/A N/A N/A 6.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.037±0.00 41.929±0.00 108.131±0.00
ENSG00000113552 ENST00000311337 8.427±0.00 7.335±0.00 2.385±0.00 5.731±3.01 4.322±2.99 5.999±4.13 3.596±2.25 19.781±0.00 1.960±0.25 6.854±0.00 10.510±0.00 14.811±7.59 12.777±3.59 10.503±4.83
ENST00000500692 N/A N/A N/A N/A N/A 1.873±0.00 N/A 5.880±0.00 N/A 1.662±0.00 N/A N/A N/A N/A
ENST00000503229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504139 N/A N/A N/A N/A 2.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507107 N/A N/A 2.224±0.00 N/A N/A N/A N/A N/A 2.637±0.00 N/A 4.704±0.00 N/A N/A N/A
ENST00000507559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508177 N/A N/A N/A N/A N/A N/A N/A N/A 1.186±0.00 0.684±0.00 0.826±0.00 N/A N/A N/A
ENST00000510194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000113555 ENST00000231484 N/A N/A N/A N/A N/A 1.055±0.00 N/A N/A N/A N/A N/A 1.427±0.58 N/A N/A
ENST00000510041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052102 ENSMUST00000063814 9.355±2.39 18.851±7.35 7.218±0.93 3.787±2.07 6.732±1.32 10.399±3.32 5.282±1.66 72.428±5.09 14.381±4.33 5.980±0.79 3.564±0.56 15.066±3.74 33.137±30.29 13.514±6.78
ENSMUST00000129062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.930±0.00 26.138±3.08 N/A
ENSMUSG00000060450 ENSMUST00000072376 11.990±4.18 12.604±3.52 16.999±0.19 47.127±3.29 16.144±6.53 9.991±3.27 15.099±4.15 14.318±6.90 7.881±1.65 7.545±2.06 9.432±4.70 15.024±2.19 25.398±1.33 6.461±2.01
ENSMUST00000170811 5.789±0.84 4.519±0.82 12.826±1.44 8.840±1.75 5.152±1.30 4.212±0.66 5.549±1.18 5.139±1.04 7.076±2.38 9.431±2.84 8.209±1.39 7.283±3.24 22.409±12.35 3.461±0.34
ENSMUST00000171461 2.511±0.00 8.523±2.37 N/A N/A 3.828±1.43 2.697±0.68 N/A 3.538±0.98 N/A 2.707±0.49 N/A 4.488±0.89 N/A 3.118±0.48
ENSMUSG00000089296 ENSMUST00000158671 N/A N/A 364.301±0.00 117.177±0.00 N/A N/A N/A N/A 56.038±0.00 N/A N/A 161.571±0.00 46.976±23.23 169.487±0.00

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