C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GABA(A) receptor-associated protein-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000034713 GABARAPL2 9606 + 16:75566351-75577881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000037243 GABARAPL2-001 75566351-75577881 protein_coding
  ENST00000563744 GABARAPL2-002 75566389-75577881 protein_coding
  ENST00000565057 GABARAPL2-004 75566375-75568405 protein_coding
  ENST00000565985 GABARAPL2-003 75575608-75577881 processed_transcript
  ENST00000568455 GABARAPL2-006 75566598-75577530 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000037243ENST00000565057ENST00000565985ENST00000568455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000037243 34.533±0.00 29.674±0.00 14.751±0.00 85.040±9.43 29.178±13.94 29.009±15.62 59.590±39.61 35.716±18.81 21.667±4.49 45.058±25.99 29.680±17.24 40.623±27.49 63.262±11.78 51.684±9.46
ENST00000565057 N/A N/A N/A N/A 6.286±0.00 N/A N/A N/A N/A N/A N/A 11.783±0.00 12.307±0.00 13.336±0.00
ENST00000565985 N/A N/A 1.465±0.00 N/A 1.668±0.00 0.996±0.00 N/A N/A N/A 1.574±0.00 N/A 0.643±0.00 N/A N/A
ENST00000568455 20.641±0.00 15.684±0.00 6.996±0.00 66.230±0.00 20.449±0.00 25.161±0.00 N/A 31.512±0.00 N/A 33.695±0.00 14.665±1.51 N/A N/A 33.361±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000288 CIL_000288_0001 CGP 16:75536744-75577881
CIL_0001GX CIL_0001GX_0001 CGP 16:75566351-75623300

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0000139 ISS Golgi membrane
GO:0000149 ISS SNARE binding
GO:0000421 IDA autophagic vacuole membrane
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005737 IDA:IEA cytoplasm
GO:0005776 IDA autophagic vacuole
GO:0005794 ISS Golgi apparatus
GO:0005829 ISS cytosol
GO:0006891 ISS intra-Golgi vesicle-mediated transport
GO:0006914 IEA:NAS autophagy
GO:0008017 NAS microtubule binding
GO:0015031 IEA protein transport
GO:0031410 IEA cytoplasmic vesicle
GO:0032781 ISS positive regulation of ATPase activity
GO:0048487 ISS beta-tubulin binding
GO:0050811 ISS GABA receptor binding
GO:0051117 ISS ATPase binding
GO:1901799 IMP negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027200 gabarapl2 GABA(A) receptor-associated protein-like 2 protein_coding Danio_rerio
ENSMUSG00000031950 Gabarapl2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 protein_coding Mus_musculus

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