C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031950 Gabarapl2 10090 + 8:111940703-111953612 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034428 Gabarapl2-001 111940703-111953612 protein_coding
  ENSMUST00000130808 Gabarapl2-003 111940758-111941771 retained_intron
  ENSMUST00000133628 Gabarapl2-002 111941068-111952742 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034428ENSMUST00000133628
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034428 12.941±1.57 23.668±1.17 19.176±2.48 20.433±1.21 12.003±4.25 24.107±3.91 17.867±6.08 30.857±4.99 20.174±3.65 26.903±3.76 15.663±8.28 9.291±3.10 16.108±6.29 9.696±3.57
ENSMUST00000133628 15.161±6.99 N/A 24.277±5.08 41.379±17.14 24.155±11.92 N/A 16.487±7.04 12.586±2.55 24.085±7.77 12.523±0.17 37.612±3.34 15.952±19.61 31.244±9.50 5.522±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000288 CIL_000288_0002 CGP 8:111912018-111953612
CIL_0001GX CIL_0001GX_0002 CGP 8:111940703-111992302

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0000421 IEA autophagic vacuole membrane
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005776 ISS autophagic vacuole
GO:0005794 IDA Golgi apparatus
GO:0006891 ISA intra-Golgi vesicle-mediated transport
GO:0006914 IEA autophagy
GO:0015031 IEA protein transport
GO:0031410 IEA cytoplasmic vesicle
GO:1901799 IEA negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027200 gabarapl2 GABA(A) receptor-associated protein-like 2 protein_coding Danio_rerio
ENSG00000034713 GABARAPL2 GABA(A) receptor-associated protein-like 2 protein_coding Homo_sapiens

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