C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000034713-ENSG00000065457 CGP 9606 16:75566351-75623300
GeneTranscriptPositionBiotype
ENSG00000034713 (GABARAPL2)
GABA(A) receptor-associated protein-like 2 		ENST00000037243 (GABARAPL2-001) 75566351-75577881 protein_coding
ENST00000563744 (GABARAPL2-002) 75566389-75577881 protein_coding
ENST00000565057 (GABARAPL2-004) 75566375-75568405 protein_coding
ENST00000565985 (GABARAPL2-003) 75575608-75577881 processed_transcript
ENST00000568455 (GABARAPL2-006) 75566598-75577530 protein_coding
ENSG00000065457 (ADAT1)
adenosine deaminase, tRNA-specific 1 		ENST00000307921 (ADAT1-001) 75600002-75623300 protein_coding
ENST00000562374 (ADAT1-005) 75620769-75623259 protein_coding
ENST00000564657 (ADAT1-006) 75617237-75622783 protein_coding
ENST00000565109 (ADAT1-007) 75617225-75623275 processed_transcript
ENST00000566445 (ADAT1-002) 75599100-75622466 nonsense_mediated_decay
ENST00000566450 (ADAT1-010) 75598133-75608957 protein_coding
ENST00000567281 (ADAT1-008) 75612804-75623281 protein_coding
ENST00000568001 (ADAT1-009) 75612788-75623281 nonsense_mediated_decay
ENST00000568478 (ADAT1-004) 75599877-75602003 processed_transcript
ENST00000568510 (ADAT1-011) 75596981-75603134 protein_coding
ENSG00000276523 (RP11-490B18.6)
 ENST00000611726 (RP11-490B18.6-001) 75572185-75572685 antisense
CIL_0001GX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031950-ENSMUSG00000031949 CGP 10090 8:111940703-111992302
GeneTranscriptPositionBiotype
ENSMUSG00000031949 (Adat1)
adenosine deaminase, tRNA-specific 1 		ENSMUST00000034427 (Adat1-001) 111966908-111992302 protein_coding
ENSMUST00000120457 (Adat1-002) 111971553-111990412 protein_coding
ENSMUST00000139820 (Adat1-003) 111970865-111992302 protein_coding
ENSMUSG00000031950 (Gabarapl2)
gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 		ENSMUST00000034428 (Gabarapl2-001) 111940703-111953612 protein_coding
ENSMUST00000130808 (Gabarapl2-003) 111940758-111941771 retained_intron
ENSMUST00000133628 (Gabarapl2-002) 111941068-111952742 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GX_0001ENSG00000034713ENST00000037243ENST00000563744ENST00000565057ENST00000565985ENST00000568455ENSG00000065457ENST00000307921ENST00000562374ENST00000564657ENST00000565109ENST00000566445ENST00000566450ENST00000567281ENST00000568001ENST00000568478ENST00000568510ENSG00000276523ENST00000611726CIL_0001GX_0002ENSMUSG00000031949ENSMUST00000034427ENSMUST00000120457ENSMUST00000139820ENSMUSG00000031950ENSMUST00000034428ENSMUST00000130808ENSMUST00000133628
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GX_0001ENSG00000034713ENST00000037243ENST00000565057ENST00000565985ENST00000568455ENSG00000065457ENST00000307921ENST00000564657ENST00000566445ENST00000568001ENSG00000276523ENST00000611726CIL_0001GX_0002ENSMUSG00000031949ENSMUST00000034427ENSMUST00000120457ENSMUST00000139820ENSMUSG00000031950ENSMUST00000034428ENSMUST00000133628
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000034713 ENST00000037243 34.533±0.00 29.674±0.00 14.751±0.00 85.040±9.43 29.178±13.94 29.009±15.62 59.590±39.61 35.716±18.81 21.667±4.49 45.058±25.99 29.680±17.24 40.623±27.49 63.262±11.78 51.684±9.46
ENST00000563744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565057 N/A N/A N/A N/A 6.286±0.00 N/A N/A N/A N/A N/A N/A 11.783±0.00 12.307±0.00 13.336±0.00
ENST00000565985 N/A N/A 1.465±0.00 N/A 1.668±0.00 0.996±0.00 N/A N/A N/A 1.574±0.00 N/A 0.643±0.00 N/A N/A
ENST00000568455 20.641±0.00 15.684±0.00 6.996±0.00 66.230±0.00 20.449±0.00 25.161±0.00 N/A 31.512±0.00 N/A 33.695±0.00 14.665±1.51 N/A N/A 33.361±0.00
ENSG00000065457 ENST00000307921 N/A N/A N/A N/A 1.790±0.00 N/A N/A 0.966±0.00 1.547±0.00 N/A N/A 1.276±0.00 N/A 9.291±5.37
ENST00000562374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564657 N/A N/A N/A N/A N/A 5.453±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566445 N/A 2.005±0.00 N/A 1.939±0.11 N/A 1.136±0.25 0.891±0.73 1.249±0.00 N/A 1.670±0.00 N/A 1.982±0.65 N/A 3.780±0.00
ENST00000566450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568001 N/A N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000568478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276523 ENST00000611726 0.135±0.00 1.084±0.00 0.498±0.00 0.550±0.00 1.060±0.91 0.139±0.00 0.359±0.00 0.182±0.04 N/A 0.488±0.00 0.341±0.00 0.210±0.10 0.112±0.03 0.547±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031949 ENSMUST00000034427 1.251±0.47 0.891±0.27 0.825±0.05 1.250±0.58 0.659±0.26 0.563±0.35 0.581±0.19 1.014±0.12 1.376±0.43 0.622±0.17 0.658±0.21 1.668±0.43 1.339±0.80 0.870±0.47
ENSMUST00000120457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.358±0.00 0.693±0.42 0.685±0.00
ENSMUST00000139820 0.557±0.16 0.545±0.00 1.599±0.38 1.100±0.14 0.781±0.43 0.622±0.32 0.149±0.03 0.471±0.11 0.955±0.40 0.698±0.14 0.464±0.09 1.207±0.32 0.675±0.28 1.331±0.24
ENSMUSG00000031950 ENSMUST00000034428 12.941±1.57 23.668±1.17 19.176±2.48 20.433±1.21 12.003±4.25 24.107±3.91 17.867±6.08 30.857±4.99 20.174±3.65 26.903±3.76 15.663±8.28 9.291±3.10 16.108±6.29 9.696±3.57
ENSMUST00000130808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133628 15.161±6.99 N/A 24.277±5.08 41.379±17.14 24.155±11.92 N/A 16.487±7.04 12.586±2.55 24.085±7.77 12.523±0.17 37.612±3.34 15.952±19.61 31.244±9.50 5.522±0.76

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