C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ornithine carbamoyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000036473 OTC 9606 + X:38352545-38421450 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000039007 OTC-001 38352545-38421450 protein_coding
  ENST00000488812 OTC-002 38352605-38403667 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000039007ENST00000488812
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000039007 0.175±0.00 2.133±0.00 0.022±0.00 0.555±0.04 0.042±0.00 11.558±11.54 1.583±1.53 0.039±0.00 N/A 0.090±0.00 0.032±0.02 0.213±0.00
ENST00000488812 N/A N/A 0.147±0.00 0.212±0.00 N/A 43.514±0.00 N/A 0.216±0.00 0.086±0.00 N/A N/A 0.175±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YY CIL_0005YY_0001 CGP X:38269163-38421450
CIL_0005QH CIL_0005QH_0001 CGP X:38352545-38688920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000050 IEA urea cycle
GO:0001889 IEA liver development
GO:0004585 IDA ornithine carbamoyltransferase activity
GO:0005543 IEA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005759 NAS mitochondrial matrix
GO:0006520 IEA cellular amino acid metabolic process
GO:0006526 IEA arginine biosynthetic process
GO:0006591 IEA ornithine metabolic process
GO:0006593 IDA ornithine catabolic process
GO:0007494 IEA midgut development
GO:0010043 IEA response to zinc ion
GO:0016597 IEA amino acid binding
GO:0016743 IEA carboxyl- or carbamoyltransferase activity
GO:0019240 IDA citrulline biosynthetic process
GO:0031667 IEA response to nutrient levels
GO:0032868 IEA response to insulin
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042301 IEA phosphate ion binding
GO:0042493 IEA response to drug
GO:0044281 TAS small molecule metabolic process
GO:0055081 IEA anion homeostasis
GO:0070207 IEA protein homotrimerization
GO:0070781 IEA response to biotin
GO:0097272 IMP ammonia homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062147 otc ornithine carbamoyltransferase protein_coding Danio_rerio
ENSMUSG00000031173 Otc ornithine transcarbamylase protein_coding Mus_musculus

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