C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ornithine carbamoyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000039007 OTC-001 ENSG00000036473 9606 + X:38352545-38421450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000039007
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000039007 0.175±0.00 2.133±0.00 0.022±0.00 0.555±0.04 0.042±0.00 11.558±11.54 1.583±1.53 0.039±0.00 0.090±0.00 0.032±0.02 0.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YY CIL_0005YY_0001 CGP X:38269163-38421450
CIL_0005QH CIL_0005QH_0001 CGP X:38352545-38688920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000050 IEA urea cycle
GO:0001889 IEA liver development
GO:0004585 IDA ornithine carbamoyltransferase activity
GO:0005543 IEA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005759 NAS mitochondrial matrix
GO:0006520 IEA cellular amino acid metabolic process
GO:0006526 IEA arginine biosynthetic process
GO:0006591 IEA ornithine metabolic process
GO:0006593 IDA ornithine catabolic process
GO:0007494 IEA midgut development
GO:0010043 IEA response to zinc ion
GO:0016597 IEA amino acid binding
GO:0016743 IEA carboxyl- or carbamoyltransferase activity
GO:0019240 IDA citrulline biosynthetic process
GO:0031667 IEA response to nutrient levels
GO:0032868 IEA response to insulin
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042301 IEA phosphate ion binding
GO:0042493 IEA response to drug
GO:0044281 TAS small molecule metabolic process
GO:0055081 IEA anion homeostasis
GO:0070207 IEA protein homotrimerization
GO:0070781 IEA response to biotin
GO:0097272 IMP ammonia homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049910 Otc-001 protein_coding Mus_musculus 0 1386
ENSMUST00000115528 Otc-002 protein_coding Mus_musculus 0 1269

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