C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 65, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000042062 FAM65C 9606 - 20:50586108-50691528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000045083 FAM65C-201 50586112-50636889 protein_coding
  ENST00000327979 FAM65C-004 50586108-50691528 protein_coding
  ENST00000462493 FAM65C-001 50596978-50636889 retained_intron
  ENST00000462842 FAM65C-005 50586665-50590012 processed_transcript
  ENST00000482129 FAM65C-003 50592538-50595192 processed_transcript
  ENST00000488529 FAM65C-002 50589717-50597609 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000045083ENST00000327979ENST00000462493ENST00000462842ENST00000482129ENST00000488529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000045083 N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A 0.267±0.00 N/A 0.812±0.00 N/A
ENST00000327979 3.295±0.00 3.404±0.00 0.323±0.00 0.094±0.00 0.547±0.18 1.743±0.00 2.133±0.00 1.695±0.68 0.906±0.00 0.438±0.09 0.158±0.00 1.336±0.52 0.189±0.00 0.549±0.00
ENST00000462493 N/A N/A N/A 0.168±0.00 N/A N/A 0.129±0.00 N/A 0.058±0.00 0.337±0.00 N/A N/A 0.203±0.04 N/A
ENST00000462842 N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A
ENST00000482129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.765±0.00 0.399±0.00 N/A
ENST00000488529 N/A N/A N/A N/A N/A N/A 0.384±0.00 N/A N/A N/A 0.442±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625
CIL_0007GS CIL_0007GS_0001 CGP 20:50510321-50691528
CIL_000170 CIL_000170_0001 CGP 20:50586108-50756795

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005576 IEA extracellular region
GO:0006955 IEA immune response
GO:0008009 IEA chemokine activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020979 FAM65C family with sequence similarity 65, member C protein_coding Danio_rerio
ENSMUSG00000074577 Fam65c family with sequence similarity 65, member C protein_coding Mus_musculus

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