C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000170_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000042062-ENSG00000124171 CGP 9606 20:50586108-50756795
GeneTranscriptPositionBiotype
ENSG00000042062 (FAM65C)
family with sequence similarity 65, member C 		ENST00000045083 (FAM65C-201) 50586112-50636889 protein_coding
ENST00000327979 (FAM65C-004) 50586108-50691528 protein_coding
ENST00000462493 (FAM65C-001) 50596978-50636889 retained_intron
ENST00000462842 (FAM65C-005) 50586665-50590012 processed_transcript
ENST00000482129 (FAM65C-003) 50592538-50595192 processed_transcript
ENST00000488529 (FAM65C-002) 50589717-50597609 processed_transcript
ENSG00000124171 (PARD6B)
par-6 family cell polarity regulator beta 		ENST00000371610 (PARD6B-001) 50731544-50753741 protein_coding
ENST00000396039 (PARD6B-002) 50731665-50756795 protein_coding
ENSG00000221091 (MIR1302-5)
microRNA 1302-5 		ENST00000408164 (MIR1302-5-201) 50614636-50614785 miRNA
ENSG00000231302 (RPL36P2)
ribosomal protein L36 pseudogene 2 		ENST00000426026 (RPL36P2-001) 50620763-50621077 processed_pseudogene
ENSG00000234693 (RP4-530I15.6)
 ENST00000435177 (RP4-530I15.6-002) 50653202-50662275 antisense
ENST00000452336 (RP4-530I15.6-001) 50645471-50660291 antisense
ENSG00000278453 (AL133230.1)
 ENST00000613599 (AL133230.1-201) 50622189-50622299 miRNA
CIL_000170_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074577-ENSMUSG00000044641 CGP 10090 2:167980164-168101203
GeneTranscriptPositionBiotype
ENSMUSG00000044641 (Pard6b)
par-6 family cell polarity regulator beta 		ENSMUST00000052125 (Pard6b-001) 168081004-168101203 protein_coding
ENSMUSG00000074577 (Fam65c)
family with sequence similarity 65, member C 		ENSMUST00000099073 (Fam65c-002) 167980166-168010618 protein_coding
ENSMUST00000123782 (Fam65c-001) 167980164-168010618 processed_transcript
ENSMUST00000131572 (Fam65c-003) 167985058-167986755 retained_intron
ENSMUST00000142702 (Fam65c-004) 167988802-167991347 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000170_0001ENSG00000042062ENST00000045083ENST00000327979ENST00000462493ENST00000462842ENST00000482129ENST00000488529ENSG00000124171ENST00000371610ENST00000396039ENSG00000221091ENST00000408164ENSG00000231302ENST00000426026ENSG00000234693ENST00000435177ENST00000452336ENSG00000278453ENST00000613599CIL_000170_0002ENSMUSG00000044641ENSMUST00000052125ENSMUSG00000074577ENSMUST00000099073ENSMUST00000123782ENSMUST00000131572ENSMUST00000142702
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000170_0001ENSG00000042062ENST00000045083ENST00000327979ENST00000462493ENST00000462842ENST00000482129ENST00000488529ENSG00000124171ENST00000371610ENSG00000221091ENST00000408164ENSG00000231302ENST00000426026ENSG00000234693ENST00000435177ENST00000452336ENSG00000278453ENST00000613599CIL_000170_0002ENSMUSG00000044641ENSMUST00000052125ENSMUSG00000074577ENSMUST00000099073ENSMUST00000123782ENSMUST00000131572ENSMUST00000142702
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000042062 ENST00000045083 N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A 0.267±0.00 N/A 0.812±0.00 N/A
ENST00000327979 3.295±0.00 3.404±0.00 0.323±0.00 0.094±0.00 0.547±0.18 1.743±0.00 2.133±0.00 1.695±0.68 0.906±0.00 0.438±0.09 0.158±0.00 1.336±0.52 0.189±0.00 0.549±0.00
ENST00000462493 N/A N/A N/A 0.168±0.00 N/A N/A 0.129±0.00 N/A 0.058±0.00 0.337±0.00 N/A N/A 0.203±0.04 N/A
ENST00000462842 N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A
ENST00000482129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.765±0.00 0.399±0.00 N/A
ENST00000488529 N/A N/A N/A N/A N/A N/A 0.384±0.00 N/A N/A N/A 0.442±0.00 N/A N/A N/A
ENSG00000124171 ENST00000371610 0.242±0.00 0.519±0.00 6.942±0.00 0.613±0.03 0.845±0.00 1.135±0.69 0.539±0.01 3.100±1.64 1.250±0.31 3.645±0.52 0.188±0.00 2.408±1.69 1.744±1.02 2.228±0.18
ENST00000396039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221091 ENST00000408164 N/A 0.154±0.00 N/A N/A N/A N/A 0.298±0.00 0.575±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000231302 ENST00000426026 0.067±0.00 0.654±0.00 N/A N/A N/A N/A N/A 0.154±0.00 N/A 0.077±0.00 N/A N/A N/A 0.140±0.00
ENSG00000234693 ENST00000435177 N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A 0.076±0.00 0.082±0.00
ENST00000452336 0.107±0.00 0.489±0.00 N/A N/A 0.030±0.00 N/A 0.186±0.00 N/A 0.078±0.00 N/A N/A N/A 0.080±0.03 N/A
ENSG00000278453 ENST00000613599 0.899±0.00 0.731±0.00 N/A 0.270±0.00 N/A N/A 0.686±0.00 0.253±0.00 0.457±0.00 0.506±0.00 N/A 15.701±0.00 N/A 0.448±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044641 ENSMUST00000052125 1.820±1.02 0.978±0.16 3.785±0.76 2.355±1.06 1.537±0.57 12.429±1.39 1.014±0.19 21.615±0.73 2.666±0.36 30.300±0.91 0.267±0.08 5.036±1.33 21.230±15.61 2.652±1.27
ENSMUSG00000074577 ENSMUST00000099073 0.728±0.44 0.241±0.00 1.595±0.60 0.165±0.00 1.920±0.50 0.678±0.37 0.195±0.09 1.979±0.63 0.608±0.34 0.198±0.05 0.023±0.00 0.613±0.24 1.337±1.41 0.082±0.01
ENSMUST00000123782 N/A 0.164±0.00 N/A 0.103±0.00 N/A N/A 0.317±0.00 N/A N/A N/A 0.122±0.09 N/A 0.464±0.00 0.067±0.06
ENSMUST00000131572 N/A 0.966±0.09 N/A N/A N/A N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A 0.179±0.04
ENSMUST00000142702 N/A 0.535±0.01 2.028±0.00 N/A 2.137±0.09 0.584±0.07 0.235±0.00 N/A N/A 1.348±0.00 N/A N/A N/A N/A

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