C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 65, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327979 FAM65C-004 ENSG00000042062 9606 - 20:50586108-50691528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327979
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327979 3.295±0.00 3.404±0.00 0.323±0.00 0.094±0.00 0.547±0.18 1.743±0.00 2.133±0.00 1.695±0.68 0.906±0.00 0.438±0.09 0.158±0.00 1.336±0.52 0.189±0.00 0.549±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625
CIL_0007GS CIL_0007GS_0001 CGP 20:50510321-50691528
CIL_000170 CIL_000170_0001 CGP 20:50586108-50756795

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005576 IEA extracellular region
GO:0006955 IEA immune response
GO:0008009 IEA chemokine activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099073 Fam65c-002 protein_coding Mus_musculus 0 1953
ENSMUST00000123782 Fam65c-001 processed_transcript Mus_musculus 0 924

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