C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: KIAA0556
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000047578 KIAA0556 9606 + 16:27550133-27780369 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261588 KIAA0556-001 27550152-27780369 protein_coding
  ENST00000562207 KIAA0556-006 27701434-27703954 retained_intron
  ENST00000564749 KIAA0556-003 27628588-27654698 retained_intron
  ENST00000565672 KIAA0556-005 27573922-27677931 nonsense_mediated_decay
  ENST00000566023 KIAA0556-002 27550133-27574295 retained_intron
  ENST00000567894 KIAA0556-004 27632464-27727873 processed_transcript
  ENST00000568258 KIAA0556-009 27573907-27677818 protein_coding
  ENST00000568622 KIAA0556-008 27776866-27778729 retained_intron
  ENST00000573850 KIAA0556-010 27698328-27755752 retained_intron
  ENST00000618117 KIAA0556-011 27618470-27631254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000261588ENST00000567894ENST00000568258ENST00000573850ENST00000618117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000261588 0.475±0.00 1.435±0.00 0.338±0.00 0.847±0.00 1.727±0.16 0.517±0.00 0.407±0.00 2.006±0.00 0.241±0.11 1.011±0.00 1.541±0.96 1.165±0.28 1.462±0.15
ENST00000567894 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A
ENST00000568258 N/A N/A N/A N/A N/A N/A 0.927±0.00 N/A N/A 1.324±0.00 N/A N/A N/A
ENST00000573850 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A
ENST00000618117 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.619±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FH CIL_0008FH_0001 VISTA 16:27337075-27938252
CIL_000435 CIL_000435_0001 CGP 16:27459555-27780369
CIL_0005TR CIL_0005TR_0001 CGP 16:27550133-28063509

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092347 si:dkey-161j23.6 si:dkey-161j23.6 protein_coding Danio_rerio
ENSDARG00000092882 si:dkey-161j23.7 si:dkey-161j23.7 protein_coding Danio_rerio
ENSDARG00000094441 si:dkey-161j23.5 si:dkey-161j23.5 protein_coding Danio_rerio
ENSMUSG00000032743 D430042O09Rik RIKEN cDNA D430042O09 gene protein_coding Mus_musculus

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