C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class II, type 9A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000054793 ATP9A 9606 - 20:51596514-51768634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311637 ATP9A-001 51596514-51768328 protein_coding
  ENST00000338821 ATP9A-003 51596514-51768634 protein_coding
  ENST00000477492 ATP9A-002 51725819-51732587 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311637ENST00000338821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311637 8.158±0.00 1.934±0.00 N/A 32.926±0.00 16.829±0.00 7.397±0.00 1.884±0.00 5.534±0.00 1.438±0.00 0.948±0.00 1.736±0.41 5.089±0.92 0.530±0.17 7.661±2.97
ENST00000338821 10.248±0.00 3.555±0.00 0.380±0.00 27.432±5.42 14.238±5.10 7.254±1.30 4.144±0.00 3.041±0.00 2.481±1.35 4.757±2.10 2.624±0.65 7.233±4.84 1.428±0.20 8.439±1.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HZ CIL_0007HZ_0001 CGP 20:51386957-51768634
CIL_0007I5 CIL_0007I5_0001 CGP 20:51596514-51802520

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005769 IDA early endosome
GO:0005802 IDA trans-Golgi network
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055037 IDA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088925 ATP9A ATPase, class II, type 9A protein_coding Danio_rerio
ENSMUSG00000027546 Atp9a ATPase, class II, type 9A protein_coding Mus_musculus

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