C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007I5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000054793-ENSG00000101115 CGP 9606 20:51596514-51802520
GeneTranscriptPositionBiotype
ENSG00000054793 (ATP9A)
ATPase, class II, type 9A 		ENST00000311637 (ATP9A-001) 51596514-51768328 protein_coding
ENST00000338821 (ATP9A-003) 51596514-51768634 protein_coding
ENST00000477492 (ATP9A-002) 51725819-51732587 processed_transcript
ENSG00000101115 (SALL4)
spalt-like transcription factor 4 		ENST00000217086 (SALL4-001) 51784042-51802520 protein_coding
ENST00000371539 (SALL4-201) 51784046-51802509 protein_coding
ENST00000395997 (SALL4-002) 51784265-51802475 protein_coding
ENST00000481363 (SALL4-004) 51792068-51793078 processed_transcript
ENST00000483130 (SALL4-003) 51791983-51801586 processed_transcript
ENSG00000215444 (RP5-827A12.2)
 ENST00000400354 (RP5-827A12.2-001) 51734533-51735067 processed_pseudogene
ENSG00000275370 (AL138807.1)
 ENST00000611310 (AL138807.1-201) 51717854-51717962 miRNA
CIL_0007I5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027546-ENSMUSG00000027547 CGP 10090 2:168634438-168767943
GeneTranscriptPositionBiotype
ENSMUSG00000027546 (Atp9a)
ATPase, class II, type 9A 		ENSMUST00000029060 (Atp9a-201) 168634438-168741800 protein_coding
ENSMUST00000109175 (Atp9a-003) 168634438-168734339 protein_coding
ENSMUST00000109176 (Atp9a-002) 168634438-168741962 protein_coding
ENSMUST00000109177 (Atp9a-001) 168634438-168742133 protein_coding
ENSMUST00000123156 (Atp9a-008) 168705160-168712913 protein_coding
ENSMUST00000140188 (Atp9a-004) 168667079-168741800 retained_intron
ENSMUST00000147757 (Atp9a-009) 168662083-168670346 processed_transcript
ENSMUST00000151610 (Atp9a-006) 168690985-168742375 protein_coding
ENSMUST00000156397 (Atp9a-005) 168690993-168742409 protein_coding
ENSMUST00000156555 (Atp9a-007) 168705227-168712962 protein_coding
ENSMUST00000178504 (Atp9a-202) 168634463-168741964 protein_coding
ENSMUSG00000027547 (Sall4)
sal-like 4 (Drosophila) 		ENSMUST00000029061 (Sall4-001) 168748332-168767201 protein_coding
ENSMUST00000075044 (Sall4-005) 168748332-168767029 protein_coding
ENSMUST00000103074 (Sall4-002) 168748332-168767201 protein_coding
ENSMUST00000125138 (Sall4-007) 168756614-168767943 processed_transcript
ENSMUST00000130640 (Sall4-003) 168756753-168767117 processed_transcript
ENSMUST00000137536 (Sall4-004) 168756181-168765246 protein_coding
ENSMUST00000150588 (Sall4-006) 168754915-168755943 protein_coding
ENSMUSG00000085322 (Gm14261)
predicted gene 14261 		ENSMUST00000145105 (Gm14261-001) 168766143-168768108 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007I5_0001ENSG00000054793ENST00000311637ENST00000338821ENST00000477492ENSG00000101115ENST00000217086ENST00000371539ENST00000395997ENST00000481363ENST00000483130ENSG00000215444ENST00000400354ENSG00000275370ENST00000611310CIL_0007I5_0002ENSMUSG00000027546ENSMUST00000029060ENSMUST00000109175ENSMUST00000109176ENSMUST00000109177ENSMUST00000123156ENSMUST00000140188ENSMUST00000147757ENSMUST00000151610ENSMUST00000156397ENSMUST00000156555ENSMUST00000178504ENSMUSG00000027547ENSMUST00000029061ENSMUST00000075044ENSMUST00000103074ENSMUST00000125138ENSMUST00000130640ENSMUST00000137536ENSMUST00000150588ENSMUSG00000085322ENSMUST00000145105
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007I5_0001ENSG00000054793ENST00000311637ENST00000338821ENSG00000101115ENST00000217086ENST00000371539ENST00000395997ENST00000481363ENSG00000215444ENST00000400354ENSG00000275370ENST00000611310CIL_0007I5_0002ENSMUSG00000027546ENSMUST00000029060ENSMUST00000109175ENSMUST00000109176ENSMUST00000109177ENSMUST00000178504ENSMUSG00000027547ENSMUST00000029061ENSMUST00000075044ENSMUST00000103074ENSMUST00000125138ENSMUST00000137536ENSMUST00000150588ENSMUSG00000085322ENSMUST00000145105
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054793 ENST00000311637 8.158±0.00 1.934±0.00 N/A 32.926±0.00 16.829±0.00 7.397±0.00 1.884±0.00 5.534±0.00 1.438±0.00 0.948±0.00 1.736±0.41 5.089±0.92 0.530±0.17 7.661±2.97
ENST00000338821 10.248±0.00 3.555±0.00 0.380±0.00 27.432±5.42 14.238±5.10 7.254±1.30 4.144±0.00 3.041±0.00 2.481±1.35 4.757±2.10 2.624±0.65 7.233±4.84 1.428±0.20 8.439±1.93
ENST00000477492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101115 ENST00000217086 0.009±0.00 0.087±0.00 N/A 0.073±0.05 0.047±0.00 N/A 0.011±0.01 0.175±0.10 N/A N/A N/A 0.395±0.33 0.031±0.00 1.071±0.39
ENST00000371539 N/A 0.073±0.00 0.051±0.00 N/A 0.603±0.00 0.042±0.00 N/A N/A N/A 0.134±0.00 N/A 0.918±0.00 0.077±0.00 N/A
ENST00000395997 0.041±0.00 N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A 0.029±0.00 N/A N/A 0.076±0.00 N/A
ENST00000481363 N/A N/A N/A N/A 0.026±0.00 0.266±0.00 N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A
ENST00000483130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215444 ENST00000400354 N/A 0.040±0.00 N/A 0.834±0.00 N/A 0.101±0.00 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000275370 ENST00000611310 1.535±0.00 2.750±0.00 N/A 2.157±0.00 0.598±0.00 2.644±0.00 1.059±0.00 N/A 1.073±0.00 2.374±0.00 N/A N/A N/A 1.260±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027546 ENSMUST00000029060 18.195±4.63 20.610±5.20 8.880±0.87 68.726±22.73 12.814±4.61 17.971±0.00 4.442±0.89 5.810±2.03 4.553±2.95 13.801±5.48 2.573±1.11 12.354±6.70 7.898±3.40 12.762±8.51
ENSMUST00000109175 N/A N/A N/A N/A N/A 27.954±5.30 3.141±0.48 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109176 N/A 6.788±2.16 N/A N/A 7.506±0.00 N/A N/A N/A 0.353±0.01 7.300±0.25 N/A 8.711±1.67 N/A 7.458±2.56
ENSMUST00000109177 37.920±19.46 13.557±1.93 6.422±2.24 21.574±0.70 29.197±6.23 72.728±10.32 13.187±1.32 15.701±2.37 7.541±5.76 17.322±5.17 3.356±1.30 20.530±9.67 13.184±11.08 6.181±3.29
ENSMUST00000123156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178504 5.323±0.00 N/A N/A N/A N/A 13.526±0.00 N/A 2.716±0.40 N/A N/A N/A 7.784±1.06 N/A 4.049±0.00
ENSMUSG00000027547 ENSMUST00000029061 N/A N/A N/A 0.160±0.00 0.013±0.00 0.041±0.02 N/A N/A 0.612±0.25 0.006±0.00 N/A 0.627±0.43 1.072±1.02 0.015±0.00
ENSMUST00000075044 0.014±0.00 0.023±0.00 N/A 0.052±0.05 0.053±0.03 0.035±0.01 N/A 0.014±0.00 N/A N/A 0.240±0.00 0.134±0.00 0.270±0.02 0.021±0.00
ENSMUST00000103074 N/A 0.027±0.00 N/A N/A 0.047±0.00 N/A N/A N/A 0.275±0.03 N/A N/A 0.217±0.17 0.315±0.10 N/A
ENSMUST00000125138 N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137536 N/A N/A N/A 0.066±0.00 0.093±0.00 0.043±0.00 N/A N/A N/A N/A N/A 0.208±0.00 2.330±0.00 N/A
ENSMUST00000150588 N/A N/A N/A N/A 0.566±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085322 ENSMUST00000145105 0.031±0.00 N/A 0.079±0.00 N/A 0.182±0.07 N/A 1.045±0.30 0.082±0.00 N/A N/A 2.210±0.62 N/A N/A N/A

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