C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007HZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101096-ENSG00000054793 CGP 9606 20:51386957-51768634
GeneTranscriptPositionBiotype
ENSG00000054793 (ATP9A)
ATPase, class II, type 9A 		ENST00000311637 (ATP9A-001) 51596514-51768328 protein_coding
ENST00000338821 (ATP9A-003) 51596514-51768634 protein_coding
ENST00000477492 (ATP9A-002) 51725819-51732587 processed_transcript
ENSG00000101096 (NFATC2)
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 		ENST00000371564 (NFATC2-001) 51386957-51542719 protein_coding
ENST00000396009 (NFATC2-002) 51386957-51542719 protein_coding
ENST00000414705 (NFATC2-004) 51391228-51562629 protein_coding
ENST00000496054 (NFATC2-003) 51391409-51399219 retained_intron
ENST00000609507 (NFATC2-006) 51391228-51562831 protein_coding
ENST00000609943 (NFATC2-005) 51388626-51562831 protein_coding
ENST00000610033 (NFATC2-007) 51391228-51542719 protein_coding
ENSG00000215444 (RP5-827A12.2)
 ENST00000400354 (RP5-827A12.2-001) 51734533-51735067 processed_pseudogene
ENSG00000275370 (AL138807.1)
 ENST00000611310 (AL138807.1-201) 51717854-51717962 miRNA
CIL_0007HZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027544-ENSMUSG00000027546 CGP 10090 2:168476410-168742409
GeneTranscriptPositionBiotype
ENSMUSG00000027544 (Nfatc2)
nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 		ENSMUST00000029057 (Nfatc2-005) 168519098-168590191 protein_coding
ENSMUST00000074618 (Nfatc2-002) 168476410-168590260 protein_coding
ENSMUST00000099067 (Nfatc2-006) 168518195-168601632 processed_transcript
ENSMUST00000109184 (Nfatc2-001) 168476410-168590365 protein_coding
ENSMUST00000137451 (Nfatc2-004) 168519098-168601657 protein_coding
ENSMUST00000138546 (Nfatc2-008) 168566477-168590365 retained_intron
ENSMUST00000140137 (Nfatc2-007) 168533463-168590331 retained_intron
ENSMUST00000151292 (Nfatc2-003) 168476413-168552276 processed_transcript
ENSMUST00000171689 (Nfatc2-201) 168518203-168601655 protein_coding
ENSMUSG00000027546 (Atp9a)
ATPase, class II, type 9A 		ENSMUST00000029060 (Atp9a-201) 168634438-168741800 protein_coding
ENSMUST00000109175 (Atp9a-003) 168634438-168734339 protein_coding
ENSMUST00000109176 (Atp9a-002) 168634438-168741962 protein_coding
ENSMUST00000109177 (Atp9a-001) 168634438-168742133 protein_coding
ENSMUST00000123156 (Atp9a-008) 168705160-168712913 protein_coding
ENSMUST00000140188 (Atp9a-004) 168667079-168741800 retained_intron
ENSMUST00000147757 (Atp9a-009) 168662083-168670346 processed_transcript
ENSMUST00000151610 (Atp9a-006) 168690985-168742375 protein_coding
ENSMUST00000156397 (Atp9a-005) 168690993-168742409 protein_coding
ENSMUST00000156555 (Atp9a-007) 168705227-168712962 protein_coding
ENSMUST00000178504 (Atp9a-202) 168634463-168741964 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HZ_0001ENSG00000054793ENST00000311637ENST00000338821ENST00000477492ENSG00000101096ENST00000371564ENST00000396009ENST00000414705ENST00000496054ENST00000609507ENST00000609943ENST00000610033ENSG00000215444ENST00000400354ENSG00000275370ENST00000611310CIL_0007HZ_0002ENSMUSG00000027544ENSMUST00000029057ENSMUST00000074618ENSMUST00000099067ENSMUST00000109184ENSMUST00000137451ENSMUST00000138546ENSMUST00000140137ENSMUST00000151292ENSMUST00000171689ENSMUSG00000027546ENSMUST00000029060ENSMUST00000109175ENSMUST00000109176ENSMUST00000109177ENSMUST00000123156ENSMUST00000140188ENSMUST00000147757ENSMUST00000151610ENSMUST00000156397ENSMUST00000156555ENSMUST00000178504
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HZ_0001ENSG00000054793ENST00000311637ENST00000338821ENSG00000101096ENST00000371564ENST00000396009ENST00000414705ENST00000609943ENSG00000215444ENST00000400354ENSG00000275370ENST00000611310CIL_0007HZ_0002ENSMUSG00000027544ENSMUST00000029057ENSMUST00000074618ENSMUST00000099067ENSMUST00000109184ENSMUST00000137451ENSMUST00000138546ENSMUST00000151292ENSMUSG00000027546ENSMUST00000029060ENSMUST00000109175ENSMUST00000109176ENSMUST00000109177ENSMUST00000178504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054793 ENST00000311637 8.158±0.00 1.934±0.00 N/A 32.926±0.00 16.829±0.00 7.397±0.00 1.884±0.00 5.534±0.00 1.438±0.00 0.948±0.00 1.736±0.41 5.089±0.92 0.530±0.17 7.661±2.97
ENST00000338821 10.248±0.00 3.555±0.00 0.380±0.00 27.432±5.42 14.238±5.10 7.254±1.30 4.144±0.00 3.041±0.00 2.481±1.35 4.757±2.10 2.624±0.65 7.233±4.84 1.428±0.20 8.439±1.93
ENST00000477492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101096 ENST00000371564 0.259±0.00 0.956±0.00 N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A 0.437±0.00 1.967±0.57 0.614±0.00
ENST00000396009 N/A N/A N/A 0.473±0.00 0.508±0.00 0.245±0.00 N/A 0.658±0.00 N/A 1.003±0.51 N/A 0.569±0.19 0.732±0.00 0.211±0.00
ENST00000414705 N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609943 N/A N/A N/A N/A N/A 0.466±0.00 0.054±0.00 0.491±0.00 0.667±0.00 N/A 0.182±0.00 2.251±0.00 0.871±0.00 N/A
ENST00000610033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215444 ENST00000400354 N/A 0.040±0.00 N/A 0.834±0.00 N/A 0.101±0.00 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000275370 ENST00000611310 1.535±0.00 2.750±0.00 N/A 2.157±0.00 0.598±0.00 2.644±0.00 1.059±0.00 N/A 1.073±0.00 2.374±0.00 N/A N/A N/A 1.260±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027544 ENSMUST00000029057 N/A N/A N/A 0.253±0.00 N/A N/A 1.975±0.33 N/A 0.061±0.00 N/A 1.225±0.00 0.345±0.00 0.278±0.00 0.388±0.24
ENSMUST00000074618 0.399±0.00 N/A 0.619±0.00 0.147±0.07 1.192±0.29 0.322±0.04 N/A 0.379±0.19 0.034±0.01 0.189±0.00 0.631±0.18 0.374±0.20 0.157±0.08 N/A
ENSMUST00000099067 N/A N/A N/A 0.612±0.50 N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.071±0.00
ENSMUST00000109184 0.544±0.23 0.960±0.25 0.131±0.00 N/A 2.777±1.50 0.868±0.21 1.090±0.30 0.488±0.12 0.031±0.01 0.510±0.11 1.149±0.59 0.587±0.19 0.178±0.11 N/A
ENSMUST00000137451 N/A N/A N/A 1.997±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138546 N/A N/A N/A N/A N/A 0.656±0.00 N/A N/A N/A N/A N/A 0.341±0.02 N/A N/A
ENSMUST00000140137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151292 0.286±0.00 N/A 0.615±0.10 0.458±0.09 0.679±0.00 0.945±0.32 0.814±0.24 0.550±0.12 0.038±0.01 N/A 1.555±0.00 0.483±0.22 0.255±0.19 0.291±0.19
ENSMUST00000171689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027546 ENSMUST00000029060 18.195±4.63 20.610±5.20 8.880±0.87 68.726±22.73 12.814±4.61 17.971±0.00 4.442±0.89 5.810±2.03 4.553±2.95 13.801±5.48 2.573±1.11 12.354±6.70 7.898±3.40 12.762±8.51
ENSMUST00000109175 N/A N/A N/A N/A N/A 27.954±5.30 3.141±0.48 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109176 N/A 6.788±2.16 N/A N/A 7.506±0.00 N/A N/A N/A 0.353±0.01 7.300±0.25 N/A 8.711±1.67 N/A 7.458±2.56
ENSMUST00000109177 37.920±19.46 13.557±1.93 6.422±2.24 21.574±0.70 29.197±6.23 72.728±10.32 13.187±1.32 15.701±2.37 7.541±5.76 17.322±5.17 3.356±1.30 20.530±9.67 13.184±11.08 6.181±3.29
ENSMUST00000123156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178504 5.323±0.00 N/A N/A N/A N/A 13.526±0.00 N/A 2.716±0.40 N/A N/A N/A 7.784±1.06 N/A 4.049±0.00

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