C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: breast carcinoma amplified sequence 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064787 BCAS1 9606 - 20:53936777-54070594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371435 BCAS1-003 53943541-54070545 protein_coding
  ENST00000371440 BCAS1-201 53943978-54070545 protein_coding
  ENST00000395961 BCAS1-001 53943541-54070594 protein_coding
  ENST00000422805 BCAS1-004 53944783-53995929 protein_coding
  ENST00000448484 BCAS1-002 53936777-54028700 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371435ENST00000371440ENST00000395961ENST00000422805ENST00000448484
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371435 N/A N/A 0.039±0.00 N/A N/A N/A 0.088±0.00 0.819±0.00 N/A 0.280±0.00 0.057±0.01 1.650±0.00
ENST00000371440 N/A 0.793±0.00 1.844±1.81 3.136±0.00 0.023±0.00 0.295±0.00 N/A N/A 0.121±0.02 0.299±0.16 0.057±0.00 1.186±0.22
ENST00000395961 0.196±0.00 N/A 6.031±0.00 3.000±2.21 N/A 0.349±0.00 1.503±0.00 0.885±0.28 N/A 0.566±0.60 0.163±0.00 N/A
ENST00000422805 N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A 0.092±0.00 N/A
ENST00000448484 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WR CIL_0000WR_0001 CGP 20:53567065-54070594
CIL_0001H3 CIL_0001H3_0001 CGP 20:53936777-54173973

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000013523 Bcas1 breast carcinoma amplified sequence 1 protein_coding Mus_musculus

Loading