C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: breast carcinoma amplified sequence 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000013523 Bcas1 10090 - 2:170346991-170427845 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000013667 Bcas1-001 170347148-170427828 protein_coding
  ENSMUST00000068137 Bcas1-003 170347144-170427845 protein_coding
  ENSMUST00000109152 Bcas1-201 170346991-170427845 protein_coding
  ENSMUST00000133673 Bcas1-004 170347945-170357113 processed_transcript
  ENSMUST00000145920 Bcas1-002 170397532-170427845 processed_transcript
  ENSMUST00000147577 Bcas1-006 170386971-170388003 processed_transcript
  ENSMUST00000152461 Bcas1-007 170348089-170349795 processed_transcript
  ENSMUST00000154650 Bcas1-005 170346991-170406509 protein_coding
  ENSMUST00000156657 Bcas1-008 170347931-170349740 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000013667ENSMUST00000068137ENSMUST00000109152ENSMUST00000133673ENSMUST00000145920ENSMUST00000147577ENSMUST00000152461ENSMUST00000154650ENSMUST00000156657
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000013667 0.052±0.00 N/A 0.511±0.00 N/A 0.127±0.06 N/A N/A N/A 0.655±0.46 0.090±0.00 N/A 0.636±0.41 0.119±0.00 N/A
ENSMUST00000068137 N/A N/A N/A 1.121±0.41 N/A N/A N/A 0.039±0.00 0.462±0.00 N/A N/A 0.622±0.25 0.064±0.00 N/A
ENSMUST00000109152 0.068±0.02 N/A 1.043±0.21 N/A N/A 10.775±1.19 0.036±0.00 N/A 0.825±0.41 0.148±0.04 N/A 0.392±0.19 0.385±0.09 N/A
ENSMUST00000133673 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.328±0.00 0.460±0.00 N/A 8.259±1.15
ENSMUST00000145920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.14 N/A N/A
ENSMUST00000147577 N/A N/A N/A N/A 0.715±0.38 N/A 0.198±0.00 N/A 0.134±0.00 N/A N/A N/A N/A N/A
ENSMUST00000152461 0.407±0.00 N/A N/A N/A 0.360±0.00 N/A 0.354±0.12 0.191±0.08 N/A 1.084±0.33 0.580±0.00 0.961±0.00 0.350±0.18 N/A
ENSMUST00000154650 0.097±0.04 0.080±0.00 N/A 24.675±33.26 0.218±0.12 N/A 0.054±0.04 0.050±0.05 0.049±0.00 N/A 0.316±0.10 0.187±0.00 0.057±0.01 N/A
ENSMUST00000156657 0.277±0.02 N/A N/A N/A 0.392±0.17 N/A 0.257±0.00 0.147±0.00 N/A 0.551±0.00 N/A 0.453±0.00 0.145±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WR CIL_0000WR_0002 CGP 2:170108643-170427845
CIL_0001H3 CIL_0001H3_0002 CGP 2:170346991-170497145

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 ISO cytosol
GO:0008150 ND biological_process
GO:0042803 ISO protein homodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000064787 BCAS1 breast carcinoma amplified sequence 1 protein_coding Homo_sapiens

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