C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395961 BCAS1-001 ENSG00000064787 9606 - 20:53943541-54070594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaENST00000395961
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000395961 0.196±0.00 6.031±0.00 3.000±2.21 0.349±0.00 1.503±0.00 0.885±0.28 0.566±0.60 0.163±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WR CIL_0000WR_0001 CGP 20:53567065-54070594
CIL_0001H3 CIL_0001H3_0001 CGP 20:53936777-54173973

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109152 Bcas1-201 protein_coding Mus_musculus 0 896
ENSMUST00000068137 Bcas1-003 protein_coding Mus_musculus 0 872
ENSMUST00000013667 Bcas1-001 protein_coding Mus_musculus 0 508
ENSMUST00000154650 Bcas1-005 protein_coding Mus_musculus 0 337

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