C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001H3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064787-ENSG00000019186 CGP 9606 20:53936777-54173973
GeneTranscriptPositionBiotype
ENSG00000019186 (CYP24A1)
cytochrome P450, family 24, subfamily A, polypeptide 1 		ENST00000216862 (CYP24A1-003) 54153449-54173973 protein_coding
ENST00000395954 (CYP24A1-006) 54154713-54171953 protein_coding
ENST00000395955 (CYP24A1-004) 54153962-54173649 protein_coding
ENST00000460643 (CYP24A1-005) 54154370-54157298 processed_transcript
ENST00000472970 (CYP24A1-001) 54172800-54173416 processed_transcript
ENST00000487593 (CYP24A1-002) 54162580-54164548 processed_transcript
ENSG00000064787 (BCAS1)
breast carcinoma amplified sequence 1 		ENST00000371435 (BCAS1-003) 53943541-54070545 protein_coding
ENST00000371440 (BCAS1-201) 53943978-54070545 protein_coding
ENST00000395961 (BCAS1-001) 53943541-54070594 protein_coding
ENST00000422805 (BCAS1-004) 53944783-53995929 protein_coding
ENST00000448484 (BCAS1-002) 53936777-54028700 protein_coding
ENSG00000236352 (AC005220.3)
 ENST00000450473 (AC005220.3-001) 53940160-53942508 antisense
CIL_0001H3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000013523-ENSMUSG00000038567 CGP 10090 2:170346991-170497145
GeneTranscriptPositionBiotype
ENSMUSG00000013523 (Bcas1)
breast carcinoma amplified sequence 1 		ENSMUST00000013667 (Bcas1-001) 170347148-170427828 protein_coding
ENSMUST00000068137 (Bcas1-003) 170347144-170427845 protein_coding
ENSMUST00000109152 (Bcas1-201) 170346991-170427845 protein_coding
ENSMUST00000133673 (Bcas1-004) 170347945-170357113 processed_transcript
ENSMUST00000145920 (Bcas1-002) 170397532-170427845 processed_transcript
ENSMUST00000147577 (Bcas1-006) 170386971-170388003 processed_transcript
ENSMUST00000152461 (Bcas1-007) 170348089-170349795 processed_transcript
ENSMUST00000154650 (Bcas1-005) 170346991-170406509 protein_coding
ENSMUST00000156657 (Bcas1-008) 170347931-170349740 processed_transcript
ENSMUSG00000038567 (Cyp24a1)
cytochrome P450, family 24, subfamily a, polypeptide 1 		ENSMUST00000038824 (Cyp24a1-001) 170482708-170497145 protein_coding
ENSMUSG00000052033 (Pfdn4)
prefoldin 4 		ENSMUST00000063682 (Pfdn4-001) 170511235-170519123 protein_coding
ENSMUST00000075087 (Pfdn4-006) 170496428-170519067 protein_coding
ENSMUST00000109147 (Pfdn4-007) 170512558-170518718 protein_coding
ENSMUST00000109148 (Pfdn4-003) 170511520-170519123 protein_coding
ENSMUST00000136839 (Pfdn4-004) 170511445-170518862 protein_coding
ENSMUST00000139328 (Pfdn4-005) 170514890-170516633 protein_coding
ENSMUST00000170167 (Pfdn4-008) 170511560-170518711 protein_coding
ENSMUSG00000084067 (Gm14269)
predicted gene 14269 		ENSMUST00000120455 (Gm14269-001) 170463514-170463819 processed_pseudogene
ENSMUSG00000086999 (Bcas1os2)
breast carcinoma amplified sequence 1, opposite strand 2 		ENSMUST00000131931 (Bcas1os2-001) 170356361-170380435 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001H3_0001ENSG00000019186ENST00000216862ENST00000395954ENST00000395955ENST00000460643ENST00000472970ENST00000487593ENSG00000064787ENST00000371435ENST00000371440ENST00000395961ENST00000422805ENST00000448484ENSG00000236352ENST00000450473CIL_0001H3_0002ENSMUSG00000013523ENSMUST00000013667ENSMUST00000068137ENSMUST00000109152ENSMUST00000133673ENSMUST00000145920ENSMUST00000147577ENSMUST00000152461ENSMUST00000154650ENSMUST00000156657ENSMUSG00000038567ENSMUST00000038824ENSMUSG00000052033ENSMUST00000063682ENSMUST00000075087ENSMUST00000109147ENSMUST00000109148ENSMUST00000136839ENSMUST00000139328ENSMUST00000170167ENSMUSG00000084067ENSMUST00000120455ENSMUSG00000086999ENSMUST00000131931
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001H3_0001ENSG00000019186ENST00000216862ENST00000395954ENST00000395955ENST00000460643ENST00000472970ENSG00000064787ENST00000371435ENST00000371440ENST00000395961ENST00000422805ENST00000448484ENSG00000236352ENST00000450473CIL_0001H3_0002ENSMUSG00000013523ENSMUST00000013667ENSMUST00000068137ENSMUST00000109152ENSMUST00000133673ENSMUST00000145920ENSMUST00000147577ENSMUST00000152461ENSMUST00000154650ENSMUST00000156657ENSMUSG00000038567ENSMUST00000038824ENSMUSG00000052033ENSMUST00000063682ENSMUST00000109147ENSMUST00000109148ENSMUST00000136839ENSMUST00000139328ENSMUST00000170167ENSMUSG00000084067ENSMUST00000120455ENSMUSG00000086999ENSMUST00000131931
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000019186 ENST00000216862 N/A N/A 1.562±0.00 0.020±0.00 0.110±0.00 N/A N/A 4.403±0.00 0.557±0.00 0.417±0.00 N/A 0.047±0.02 0.501±0.06 0.019±0.01
ENST00000395954 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A 0.109±0.00 N/A 0.089±0.03 0.252±0.00 N/A
ENST00000395955 N/A N/A N/A N/A N/A N/A 0.012±0.00 2.791±0.00 N/A 0.569±0.00 N/A 0.070±0.05 0.239±0.10 0.031±0.00
ENST00000460643 0.081±0.00 N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A 0.673±0.00 N/A N/A N/A N/A
ENST00000472970 N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000064787 ENST00000371435 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.088±0.00 0.819±0.00 N/A 0.280±0.00 0.057±0.01 1.650±0.00
ENST00000371440 N/A N/A 0.793±0.00 N/A 1.844±1.81 3.136±0.00 0.023±0.00 0.295±0.00 N/A N/A 0.121±0.02 0.299±0.16 0.057±0.00 1.186±0.22
ENST00000395961 N/A 0.196±0.00 N/A N/A 6.031±0.00 3.000±2.21 N/A 0.349±0.00 1.503±0.00 0.885±0.28 N/A 0.566±0.60 0.163±0.00 N/A
ENST00000422805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A 0.092±0.00 N/A
ENST00000448484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A
ENSG00000236352 ENST00000450473 N/A N/A N/A N/A 0.121±0.00 N/A 0.153±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000013523 ENSMUST00000013667 0.052±0.00 N/A 0.511±0.00 N/A 0.127±0.06 N/A N/A N/A 0.655±0.46 0.090±0.00 N/A 0.636±0.41 0.119±0.00 N/A
ENSMUST00000068137 N/A N/A N/A 1.121±0.41 N/A N/A N/A 0.039±0.00 0.462±0.00 N/A N/A 0.622±0.25 0.064±0.00 N/A
ENSMUST00000109152 0.068±0.02 N/A 1.043±0.21 N/A N/A 10.775±1.19 0.036±0.00 N/A 0.825±0.41 0.148±0.04 N/A 0.392±0.19 0.385±0.09 N/A
ENSMUST00000133673 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.328±0.00 0.460±0.00 N/A 8.259±1.15
ENSMUST00000145920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.14 N/A N/A
ENSMUST00000147577 N/A N/A N/A N/A 0.715±0.38 N/A 0.198±0.00 N/A 0.134±0.00 N/A N/A N/A N/A N/A
ENSMUST00000152461 0.407±0.00 N/A N/A N/A 0.360±0.00 N/A 0.354±0.12 0.191±0.08 N/A 1.084±0.33 0.580±0.00 0.961±0.00 0.350±0.18 N/A
ENSMUST00000154650 0.097±0.04 0.080±0.00 N/A 24.675±33.26 0.218±0.12 N/A 0.054±0.04 0.050±0.05 0.049±0.00 N/A 0.316±0.10 0.187±0.00 0.057±0.01 N/A
ENSMUST00000156657 0.277±0.02 N/A N/A N/A 0.392±0.17 N/A 0.257±0.00 0.147±0.00 N/A 0.551±0.00 N/A 0.453±0.00 0.145±0.00 N/A
ENSMUSG00000038567 ENSMUST00000038824 N/A N/A N/A N/A N/A N/A N/A 15.359±1.53 N/A N/A N/A N/A 1.917±1.40 0.262±0.00
ENSMUSG00000052033 ENSMUST00000063682 1.483±0.40 N/A 11.797±2.94 19.996±2.43 1.009±0.25 0.816±0.00 0.868±0.31 N/A 8.944±9.40 1.462±0.02 2.633±0.68 N/A 26.380±1.19 2.129±0.61
ENSMUST00000075087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.170±0.00 N/A N/A
ENSMUST00000109148 N/A N/A N/A N/A N/A 2.007±0.00 0.727±0.06 N/A 3.788±4.52 1.534±0.23 2.261±0.67 9.015±5.35 9.184±7.51 0.730±0.35
ENSMUST00000136839 2.084±0.74 2.641±0.00 N/A 7.609±4.42 1.535±0.44 2.235±0.14 1.463±0.26 N/A 6.141±6.07 2.239±0.00 2.190±0.39 12.117±7.98 15.776±12.69 3.691±1.61
ENSMUST00000139328 0.795±0.00 N/A N/A N/A 0.429±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170167 N/A N/A N/A 12.272±0.00 N/A N/A N/A N/A N/A N/A N/A 10.660±0.00 15.222±8.29 5.939±0.00
ENSMUSG00000084067 ENSMUST00000120455 N/A N/A 0.059±0.00 N/A 0.445±0.00 0.827±0.00 0.269±0.00 0.277±0.01 N/A N/A 0.139±0.02 N/A 0.219±0.14 1.100±1.09
ENSMUSG00000086999 ENSMUST00000131931 N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A 0.213±0.00 0.054±0.00 0.959±0.00

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