C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000067048 DDX3Y 9606 + Y:12904108-12920478 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336079 DDX3Y-003 12904831-12920478 protein_coding
  ENST00000360160 DDX3Y-001 12904108-12918539 protein_coding
  ENST00000440554 DDX3Y-005 12905738-12914649 protein_coding
  ENST00000454054 DDX3Y-004 12904118-12913853 protein_coding
  ENST00000463199 DDX3Y-007 12913008-12915227 processed_transcript
  ENST00000469101 DDX3Y-006 12912640-12913801 processed_transcript
  ENST00000472510 DDX3Y-009 12912963-12914899 processed_transcript
  ENST00000493363 DDX3Y-002 12904849-12909696 processed_transcript
  ENST00000495478 DDX3Y-008 12915496-12916353 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000336079ENST00000360160ENST00000440554ENST00000463199ENST00000469101ENST00000493363
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000336079 0.015±0.00 17.141±0.00 2.816±0.00 2.061±2.05 0.008±0.00 0.807±0.80 4.835±3.70 3.409±0.00 4.409±3.00 10.054±0.50 4.440±0.00 6.636±0.43 11.367±0.16
ENST00000360160 N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.014±0.00 N/A N/A N/A N/A 11.793±2.10
ENST00000440554 N/A N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A N/A 1.100±0.00 N/A N/A
ENST00000463199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A
ENST00000469101 N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493363 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005774 pl10 pl10 protein_coding Danio_rerio
ENSDARG00000020573 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 protein_coding Danio_rerio
ENSMUSG00000069045 Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked protein_coding Mus_musculus

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