C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pl10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005774 pl10 7955 + 6:59558985-59576603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102148 pl10-001 59558999-59576603 protein_coding
  ENSDART00000154000 pl10-006 59571802-59574592 retained_intron
  ENSDART00000154647 pl10-003 59566559-59572036 protein_coding
  ENSDART00000154985 pl10-002 59558985-59565276 protein_coding
  ENSDART00000155884 pl10-004 59571032-59572036 retained_intron
  ENSDART00000156077 pl10-007 59573526-59574595 retained_intron
  ENSDART00000157012 pl10-005 59571362-59572675 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102148
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102148 41.438±24.05 4.919±2.76 8.907±0.00 14.377±0.00 23.653±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0001 CGP 6:59558985-59621279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000067048 DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked protein_coding Homo_sapiens
ENSG00000215301 DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked protein_coding Homo_sapiens
ENSG00000280001 DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked protein_coding Homo_sapiens
ENSMUSG00000000787 Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked protein_coding Mus_musculus
ENSMUSG00000039224 D1Pas1 DNA segment, Chr 1, Pasteur Institute 1 protein_coding Mus_musculus
ENSMUSG00000069045 Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked protein_coding Mus_musculus

Loading