Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	DEAD (Asp-Glu-Ala-Asp) box polypeptide 3
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSDARG00000020573	ddx3	7955	+	9:34367809-34388046	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSDART00000006867		ddx3-001	34367809-34388046	protein_coding
	ENSDART00000140064		ddx3-002	34373619-34379577	protein_coding
Danio rerio EnsemblZv9 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Brain	Heart	Kidney	Liver	Muscle
ENSDART00000006867	29.634±5.77	25.150±19.03	20.214±5.05	12.128±0.00	8.566±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007LW	CIL_0007LW_0004	UCNEbase	9:34353947-34387450
CIL_0001X4	CIL_0001X4_0001	CGP	9:34367809-34394507

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000166	IEA	nucleotide binding
GO:0003676	IEA	nucleic acid binding
GO:0004386	IEA	helicase activity
GO:0005524	IEA	ATP binding
GO:0005575	ND	cellular_component
GO:0008026	IEA	ATP-dependent helicase activity
GO:0016787	IEA	hydrolase activity

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSG00000067048	DDX3Y	DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked	protein_coding	Homo_sapiens
ENSG00000215301	DDX3X	DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked	protein_coding	Homo_sapiens
ENSG00000280001	DDX3Y	DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked	protein_coding	Homo_sapiens
ENSMUSG00000000787	Ddx3x	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein_coding	Mus_musculus
ENSMUSG00000039224	D1Pas1	DNA segment, Chr 1, Pasteur Institute 1	protein_coding	Mus_musculus
ENSMUSG00000069045	Ddx3y	DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein_coding	Mus_musculus

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