C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069045 Ddx3y 10090 - Y:1260771-1286629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000091190 Ddx3y-001 1260771-1286629 protein_coding
  ENSMUST00000187596 Ddx3y-004 1263796-1264459 retained_intron
  ENSMUST00000188182 Ddx3y-003 1260772-1265031 retained_intron
  ENSMUST00000188484 Ddx3y-002 1262313-1286582 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000091190ENSMUST00000188182ENSMUST00000188484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091190 N/A 0.744±0.12 5.008±0.02 3.048±0.83 N/A 1.208±0.57 4.912±0.16 7.369±3.43 4.270±1.30 11.338±1.12 N/A 5.018±1.94 0.707±0.17
ENSMUST00000188182 0.019±0.00 N/A 1.267±0.00 0.815±0.17 0.083±0.08 N/A N/A 0.535±0.53 N/A N/A N/A N/A 0.204±0.00
ENSMUST00000188484 0.025±0.00 0.692±0.02 N/A 21.647±0.00 N/A 0.631±0.02 N/A N/A 1.949±0.91 N/A 0.006±0.00 10.851±8.14 1.256±1.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005774 pl10 pl10 protein_coding Danio_rerio
ENSDARG00000020573 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 protein_coding Danio_rerio
ENSG00000067048 DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked protein_coding Homo_sapiens
ENSG00000280001 DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked protein_coding Homo_sapiens

Loading