C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: translocation associated membrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000067167 TRAM1 9606 - 8:70573442-70608387 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262213 TRAM1-001 70573442-70608369 protein_coding
  ENST00000518678 TRAM1-004 70597891-70608387 protein_coding
  ENST00000520700 TRAM1-005 70594501-70608352 processed_transcript
  ENST00000521049 TRAM1-003 70583706-70608339 processed_transcript
  ENST00000521425 TRAM1-002 70573442-70607778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262213ENST00000521049ENST00000521425
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262213 36.901±0.00 31.630±0.00 7.930±0.00 8.190±4.70 20.838±10.21 22.749±12.44 8.840±5.56 39.948±19.87 32.584±24.20 38.622±22.28 6.834±0.00 21.589±10.09 29.849±10.60 18.444±16.43
ENST00000521049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.586±0.00 N/A 11.019±0.00
ENST00000521425 N/A N/A N/A N/A 2.043±0.00 1.204±0.00 N/A N/A N/A N/A N/A N/A N/A 5.253±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BN CIL_0003BN_0001 CGP 8:70109762-70608387
CIL_0001DD CIL_0001DD_0001 CGP 8:70573442-70669174

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006412 TAS translation
GO:0006613 TAS cotranslational protein targeting to membrane
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016021 IEA integral component of membrane
GO:0016032 IEA viral process
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019137 tram1 translocating chain-associating membrane protein 1 protein_coding Danio_rerio
ENSMUSG00000025935 Tram1 translocating chain-associating membrane protein 1 protein_coding Mus_musculus

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