C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphorylase, glycogen, muscle
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000068976 PYGM 9606 - 11:64746389-64760297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000164139 PYGM-001 64746389-64760297 protein_coding
  ENST00000377432 PYGM-002 64746389-64759974 protein_coding
  ENST00000460413 PYGM-005 64753671-64754421 processed_transcript
  ENST00000462303 PYGM-004 64751148-64752015 processed_transcript
  ENST00000483742 PYGM-003 64746389-64748888 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000164139ENST00000377432ENST00000460413ENST00000462303ENST00000483742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000164139 0.811±0.00 4.546±0.00 N/A 5.484±3.02 24.916±24.29 3.123±1.72 12.651±2.95 0.091±0.07 5.069±0.00 0.952±0.00 261.034±71.77 1.705±1.82 1.098±0.17 7.348±4.53
ENST00000377432 1.236±0.00 9.444±0.00 0.073±0.00 15.744±0.00 132.244±0.00 10.051±0.00 33.651±0.00 1.272±0.00 0.257±0.00 0.678±0.26 361.690±111.31 1.081±0.91 0.825±0.05 14.395±12.44
ENST00000460413 N/A N/A 0.476±0.00 N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A 1.280±0.00 N/A N/A
ENST00000462303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A
ENST00000483742 N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 0.059±0.00 0.380±0.00 N/A 0.115±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005J1 CIL_0005J1_0002 CGP 11:64726911-64760297

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004645 IEA phosphorylase activity
GO:0005829 TAS cytosol
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005977 TAS glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0008184 IEA glycogen phosphorylase activity
GO:0030170 IEA pyridoxal phosphate binding
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013317 pygmb phosphorylase, glycogen (muscle) b protein_coding Danio_rerio
ENSDARG00000055518 pygma phosphorylase, glycogen (muscle) A protein_coding Danio_rerio
ENSMUSG00000032648 Pygm muscle glycogen phosphorylase protein_coding Mus_musculus

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