C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005J1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062328-ENSDARG00000055518 CGP 7955 21:27810282-27866633
GeneTranscriptPositionBiotype
ENSDARG00000055518 (pygma)
phosphorylase, glycogen (muscle) A 		ENSDART00000077871 (pygma-001) 27839446-27866633 protein_coding
ENSDARG00000062328 (rasgrp2)
RAS guanyl releasing protein 2 (calcium and DAG-regulated) 		ENSDART00000089980 (rasgrp2-201) 27810282-27833993 protein_coding
ENSDART00000132844 (rasgrp2-001) 27812547-27833990 protein_coding
CIL_0005J1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000068831-ENSG00000068976 CGP 9606 11:64726911-64760297
GeneTranscriptPositionBiotype
ENSG00000068831 (RASGRP2)
RAS guanyl releasing protein 2 (calcium and DAG-regulated) 		ENST00000354024 (RASGRP2-002) 64726911-64745456 protein_coding
ENST00000377485 (RASGRP2-013) 64741026-64744997 protein_coding
ENST00000377486 (RASGRP2-010) 64740866-64744145 protein_coding
ENST00000377487 (RASGRP2-009) 64740866-64744859 protein_coding
ENST00000377489 (RASGRP2-008) 64740866-64745333 protein_coding
ENST00000377494 (RASGRP2-007) 64726911-64743789 protein_coding
ENST00000377497 (RASGRP2-003) 64726911-64744834 protein_coding
ENST00000394428 (RASGRP2-012) 64740866-64742937 protein_coding
ENST00000394429 (RASGRP2-011) 64740866-64742937 protein_coding
ENST00000394430 (RASGRP2-005) 64740868-64744589 protein_coding
ENST00000394432 (RASGRP2-001) 64726911-64744178 protein_coding
ENST00000419843 (RASGRP2-014) 64742826-64744317 protein_coding
ENST00000421556 (RASGRP2-004) 64726911-64744122 nonsense_mediated_decay
ENST00000430645 (RASGRP2-022) 64741068-64744867 protein_coding
ENST00000431822 (RASGRP2-016) 64739636-64744118 protein_coding
ENST00000441258 (RASGRP2-025) 64740126-64744831 nonsense_mediated_decay
ENST00000445445 (RASGRP2-017) 64739379-64742946 nonsense_mediated_decay
ENST00000464324 (RASGRP2-006) 64726911-64740883 retained_intron
ENST00000465852 (RASGRP2-019) 64735374-64737244 retained_intron
ENST00000480443 (RASGRP2-023) 64742511-64744860 retained_intron
ENST00000488071 (RASGRP2-020) 64726946-64735266 retained_intron
ENST00000494001 (RASGRP2-024) 64730181-64737034 retained_intron
ENST00000497441 (RASGRP2-018) 64735112-64737254 retained_intron
ENSG00000068976 (PYGM)
phosphorylase, glycogen, muscle 		ENST00000164139 (PYGM-001) 64746389-64760297 protein_coding
ENST00000377432 (PYGM-002) 64746389-64759974 protein_coding
ENST00000460413 (PYGM-005) 64753671-64754421 processed_transcript
ENST00000462303 (PYGM-004) 64751148-64752015 processed_transcript
ENST00000483742 (PYGM-003) 64746389-64748888 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005J1_0001ENSDARG00000055518ENSDART00000077871ENSDARG00000062328ENSDART00000089980ENSDART00000132844CIL_0005J1_0002ENSG00000068831ENST00000354024ENST00000377485ENST00000377486ENST00000377487ENST00000377489ENST00000377494ENST00000377497ENST00000394428ENST00000394429ENST00000394430ENST00000394432ENST00000419843ENST00000421556ENST00000430645ENST00000431822ENST00000441258ENST00000445445ENST00000464324ENST00000465852ENST00000480443ENST00000488071ENST00000494001ENST00000497441ENSG00000068976ENST00000164139ENST00000377432ENST00000460413ENST00000462303ENST00000483742
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005J1_0001ENSDARG00000055518ENSDART00000077871ENSDARG00000062328ENSDART00000089980CIL_0005J1_0002ENSG00000068831ENST00000354024ENST00000377485ENST00000377487ENST00000377489ENST00000377494ENST00000377497ENST00000394428ENST00000394430ENST00000394432ENST00000419843ENST00000431822ENST00000445445ENST00000464324ENST00000488071ENST00000494001ENST00000497441ENSG00000068976ENST00000164139ENST00000377432ENST00000460413ENST00000462303ENST00000483742
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055518 ENSDART00000077871 N/A N/A N/A 0.521±0.16 N/A N/A 11.768±0.04 9.102±0.00 0.108±0.00 N/A 29.735±0.00 N/A N/A N/A
ENSDARG00000062328 ENSDART00000089980 N/A N/A N/A 0.075±0.04 N/A N/A 0.707±0.23 3.714±0.00 0.136±0.00 N/A 0.297±0.00 N/A N/A N/A
ENSDART00000132844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000068831 ENST00000354024 N/A N/A N/A N/A 0.871±0.00 N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A 1.183±0.37
ENST00000377485 N/A N/A N/A N/A 1.281±0.00 N/A N/A N/A N/A N/A 2.551±0.00 0.718±0.00 N/A N/A
ENST00000377486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377487 N/A N/A N/A N/A N/A N/A 9.589±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000377489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.191±0.00 N/A
ENST00000377494 1.542±0.00 N/A N/A 1.064±0.00 0.922±0.00 N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A 1.616±0.00
ENST00000377497 1.752±0.00 15.015±0.00 N/A 4.579±0.00 N/A 2.615±0.00 N/A 1.699±0.00 0.393±0.00 2.429±0.00 0.491±0.00 2.608±0.15 5.319±2.42 4.034±0.00
ENST00000394428 N/A N/A N/A N/A N/A N/A 5.019±4.68 N/A 2.540±0.00 N/A N/A 2.120±0.00 23.398±0.00 4.222±0.00
ENST00000394429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394430 N/A 23.000±0.00 0.546±0.00 N/A 1.087±0.00 N/A 0.194±0.00 N/A N/A N/A N/A 0.581±0.00 N/A 1.596±0.00
ENST00000394432 1.682±0.00 N/A N/A 1.156±0.00 N/A N/A N/A N/A N/A N/A N/A 0.690±0.00 N/A 0.863±0.00
ENST00000419843 N/A N/A N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000421556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431822 N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445445 N/A N/A N/A N/A N/A N/A 0.197±0.00 1.539±0.00 N/A 3.802±0.00 N/A N/A N/A N/A
ENST00000464324 N/A N/A N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488071 N/A N/A 0.417±0.00 N/A N/A N/A N/A 1.628±0.00 N/A N/A N/A 0.618±0.00 N/A N/A
ENST00000494001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.450±0.00 N/A N/A
ENST00000497441 N/A N/A 0.567±0.00 1.265±0.00 0.302±0.00 N/A N/A 3.108±0.00 1.667±0.00 4.115±0.31 N/A N/A 6.850±0.00 5.119±0.00
ENSG00000068976 ENST00000164139 0.811±0.00 4.546±0.00 N/A 5.484±3.02 24.916±24.29 3.123±1.72 12.651±2.95 0.091±0.07 5.069±0.00 0.952±0.00 261.034±71.77 1.705±1.82 1.098±0.17 7.348±4.53
ENST00000377432 1.236±0.00 9.444±0.00 0.073±0.00 15.744±0.00 132.244±0.00 10.051±0.00 33.651±0.00 1.272±0.00 0.257±0.00 0.678±0.26 361.690±111.31 1.081±0.91 0.825±0.05 14.395±12.44
ENST00000460413 N/A N/A 0.476±0.00 N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A 1.280±0.00 N/A N/A
ENST00000462303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A
ENST00000483742 N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 0.059±0.00 0.380±0.00 N/A 0.115±0.00 N/A N/A

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