C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase, glycogen, muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377432 PYGM-002 ENSG00000068976 9606 - 11:64746389-64759974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377432
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377432 1.236±0.00 9.444±0.00 0.073±0.00 15.744±0.00 132.244±0.00 10.051±0.00 33.651±0.00 1.272±0.00 0.257±0.00 0.678±0.26 361.690±111.31 1.081±0.91 0.825±0.05 14.395±12.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005J1 CIL_0005J1_0002 CGP 11:64726911-64760297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004645 IEA phosphorylase activity
GO:0005829 TAS cytosol
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005977 TAS glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0008184 IEA glycogen phosphorylase activity
GO:0030170 IEA pyridoxal phosphate binding
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113483 Pygm-004 protein_coding Mus_musculus 0 2944
ENSMUST00000035269 Pygm-001 protein_coding Mus_musculus 0 2682
ENSMUST00000045441 Pygb-001 protein_coding Mus_musculus 0 1373
ENSMUST00000139775 Pygm-002 retained_intron Mus_musculus 0 551
ENSMUST00000129610 Pygb-004 retained_intron Mus_musculus 0 372
ENSMUST00000154366 Pygb-003 retained_intron Mus_musculus 0 246

Loading